Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:33279246-34007432

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trdn 10 33083483 to 33476709 393226 + protein coding gene triadin
Gm19073 10 33300123 to 33300658 535 - pseudogene predicted gene, 19073
Tssr92915 10 33305030 to 33305045 15 + TSS region transcription start site region 92915
Gm47842 10 33324012 to 33327775 3763 - pseudogene predicted gene, 47842
Tssr92916 10 33359327 to 33359329 2 + TSS region transcription start site region 92916
Tssr92917 10 33364350 to 33364352 2 + TSS region transcription start site region 92917
Tssr92918 10 33364444 to 33364453 9 + TSS region transcription start site region 92918
Tssr92919 10 33412027 to 33412041 14 + TSS region transcription start site region 92919
Gm29884 10 33412076 to 33412528 452 + pseudogene predicted gene, 29884
Gm47844 10 33435482 to 33436853 1371 - pseudogene predicted gene, 47844
Tssr3173 10 33461689 to 33461690 1 + TSS region transcription start site region 3173
Gm20304 10 33463905 to 33464348 443 + pseudogene predicted gene, 20304
Gm47908 10 33477115 to 33477472 357 - unclassified gene predicted gene, 47908
Clvs2 10 33512286 to 33624600 112314 - protein coding gene clavesin 2
Gm47910 10 33580688 to 33583829 3141 - unclassified gene predicted gene, 47910
Gm47911 10 33619236 to 33621709 2473 - unclassified gene predicted gene, 47911
Tssr97228 10 33624150 to 33624175 25 - TSS region transcription start site region 97228
Gm15939 10 33624246 to 33662432 38186 + antisense lncRNA gene predicted gene 15939
Cpgi1428 10 33624350 to 33624683 333 CpG island CpG island 1428
Tssr97229 10 33624587 to 33624611 24 - TSS region transcription start site region 97229
D10Mit52 10 33707010 to 33707170 160 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 52
Gm47929 10 33714892 to 33715387 495 + pseudogene predicted gene, 47929
Sult3a2 10 33766424 to 33786704 20280 - protein coding gene sulfotransferase family 3A, member 2
Tssr97230 10 33786715 to 33786737 22 - TSS region transcription start site region 97230
Gm10327 10 33808497 to 33809498 1001 - pseudogene predicted pseudogene 10327
Tssr97231 10 33809571 to 33809573 2 - TSS region transcription start site region 97231
Tssr92920 10 33851000 to 33851004 4 + TSS region transcription start site region 92920
Tssr92921 10 33857710 to 33857713 3 + TSS region transcription start site region 92921
Sult3a1 10 33857721 to 33879532 21811 + protein coding gene sulfotransferase family 3A, member 1
Gm47935 10 33872634 to 33873018 384 - pseudogene predicted gene, 47935
Gm47940 10 33894093 to 33894256 163 - pseudogene predicted gene, 47940
Tssr92922 10 33905015 to 33905047 32 + TSS region transcription start site region 92922
Rsph4a 10 33905111 to 33916021 10910 + protein coding gene radial spoke head 4 homolog A (Chlamydomonas)
Zup1 10 33919142 to 33951269 32127 - protein coding gene zinc finger containing ubiquitin peptidase 1
Tssr97232 10 33924662 to 33924677 15 - TSS region transcription start site region 97232
Tssr97233 10 33927027 to 33927041 14 - TSS region transcription start site region 97233
Tssr97234 10 33933068 to 33933088 20 - TSS region transcription start site region 97234
Tssr97235 10 33933131 to 33933148 17 - TSS region transcription start site region 97235
Tssr97236 10 33933159 to 33933170 11 - TSS region transcription start site region 97236
Tssr97237 10 33933177 to 33933189 12 - TSS region transcription start site region 97237
Tssr97238 10 33933201 to 33933222 21 - TSS region transcription start site region 97238
Tssr97239 10 33933394 to 33933406 12 - TSS region transcription start site region 97239
Tssr97240 10 33936627 to 33936651 24 - TSS region transcription start site region 97240
Tssr97241 10 33937613 to 33937655 42 - TSS region transcription start site region 97241
Tssr97242 10 33939883 to 33939899 16 - TSS region transcription start site region 97242
Tssr97243 10 33947808 to 33947813 5 - TSS region transcription start site region 97243
Tssr97244 10 33949489 to 33949502 13 - TSS region transcription start site region 97244
Cpgi1429 10 33950835 to 33951333 498 CpG island CpG island 1429
Tssr97245 10 33951190 to 33951263 73 - TSS region transcription start site region 97245
Gm48018 10 33969983 to 33976689 6706 + pseudogene predicted gene, 48018
Gm7940 10 33972801 to 33973569 768 - pseudogene predicted gene 7940
Gm48034 10 33980497 to 33980840 343 - pseudogene predicted gene, 48034
A830082N09Rik 10 33987216 to 33995055 7839 - lncRNA gene RIKEN cDNA A830082N09 gene
Rwdd1 10 33996555 to 34019616 23061 - protein coding gene RWD domain containing 1