Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:33227286-33909600

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trdn 10 33083483 to 33476709 393226 + protein coding gene triadin
D830005E20Rik 10 33222345 to 33256357 34012 - antisense lncRNA gene RIKEN cDNA D830005E20 gene
Tssr92906 10 33233845 to 33233877 32 + TSS region transcription start site region 92906
Tssr92907 10 33233897 to 33233907 10 + TSS region transcription start site region 92907
Tssr97225 10 33256231 to 33256244 13 - TSS region transcription start site region 97225
Tssr97226 10 33256344 to 33256362 18 - TSS region transcription start site region 97226
Tssr97227 10 33256369 to 33256382 13 - TSS region transcription start site region 97227
Tssr92908 10 33256512 to 33256522 10 + TSS region transcription start site region 92908
Tssr92909 10 33256525 to 33256540 15 + TSS region transcription start site region 92909
Tssr92910 10 33256541 to 33256564 23 + TSS region transcription start site region 92910
Tssr92911 10 33256579 to 33256611 32 + TSS region transcription start site region 92911
Tssr92912 10 33256929 to 33256930 1 + TSS region transcription start site region 92912
Tssr92913 10 33256942 to 33256968 26 + TSS region transcription start site region 92913
Tssr92914 10 33257095 to 33257110 15 + TSS region transcription start site region 92914
Gm19073 10 33300123 to 33300658 535 - pseudogene predicted gene, 19073
Tssr92915 10 33305030 to 33305045 15 + TSS region transcription start site region 92915
Gm47842 10 33324012 to 33327775 3763 - pseudogene predicted gene, 47842
Tssr92916 10 33359327 to 33359329 2 + TSS region transcription start site region 92916
Tssr92917 10 33364350 to 33364352 2 + TSS region transcription start site region 92917
Tssr92918 10 33364444 to 33364453 9 + TSS region transcription start site region 92918
Tssr92919 10 33412027 to 33412041 14 + TSS region transcription start site region 92919
Gm29884 10 33412076 to 33412528 452 + pseudogene predicted gene, 29884
Gm47844 10 33435482 to 33436853 1371 - pseudogene predicted gene, 47844
Tssr3173 10 33461689 to 33461690 1 + TSS region transcription start site region 3173
Gm20304 10 33463905 to 33464348 443 + pseudogene predicted gene, 20304
Gm47908 10 33477115 to 33477472 357 - unclassified gene predicted gene, 47908
Clvs2 10 33512286 to 33624600 112314 - protein coding gene clavesin 2
Gm47910 10 33580688 to 33583829 3141 - unclassified gene predicted gene, 47910
Gm47911 10 33619236 to 33621709 2473 - unclassified gene predicted gene, 47911
Tssr97228 10 33624150 to 33624175 25 - TSS region transcription start site region 97228
Gm15939 10 33624246 to 33662432 38186 + antisense lncRNA gene predicted gene 15939
Cpgi1428 10 33624350 to 33624683 333 CpG island CpG island 1428
Tssr97229 10 33624587 to 33624611 24 - TSS region transcription start site region 97229
D10Mit52 10 33707010 to 33707170 160 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 52
Gm47929 10 33714892 to 33715387 495 + pseudogene predicted gene, 47929
Sult3a2 10 33766424 to 33786704 20280 - protein coding gene sulfotransferase family 3A, member 2
Tssr97230 10 33786715 to 33786737 22 - TSS region transcription start site region 97230
Gm10327 10 33808497 to 33809498 1001 - pseudogene predicted pseudogene 10327
Tssr97231 10 33809571 to 33809573 2 - TSS region transcription start site region 97231
Tssr92920 10 33851000 to 33851004 4 + TSS region transcription start site region 92920
Tssr92921 10 33857710 to 33857713 3 + TSS region transcription start site region 92921
Sult3a1 10 33857721 to 33879532 21811 + protein coding gene sulfotransferase family 3A, member 1
Gm47935 10 33872634 to 33873018 384 - pseudogene predicted gene, 47935
Gm47940 10 33894093 to 33894256 163 - pseudogene predicted gene, 47940
Tssr92922 10 33905015 to 33905047 32 + TSS region transcription start site region 92922
Rsph4a 10 33905111 to 33916021 10910 + protein coding gene radial spoke head 4 homolog A (Chlamydomonas)