Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:31539555-33200292

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59 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf217 10 31501887 to 31609725 107838 - protein coding gene ring finger protein 217
D10Mit155 10 31550768 to 31550915 147 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 155
Gm47693 10 31555920 to 31557440 1520 - unclassified gene predicted gene, 47693
Gm7909 10 31574400 to 31575013 613 - pseudogene predicted gene 7909
Tssr97205 10 31599796 to 31599800 4 - TSS region transcription start site region 97205
Cpgi1426 10 31608300 to 31610037 1737 CpG island CpG island 1426
Tssr97206 10 31608613 to 31608630 17 - TSS region transcription start site region 97206
Tssr97207 10 31609638 to 31609705 67 - TSS region transcription start site region 97207
Tssr97208 10 31609718 to 31609732 14 - TSS region transcription start site region 97208
Tssr97209 10 31609818 to 31609870 52 - TSS region transcription start site region 97209
Gm8793 10 31639158 to 31640460 1302 + pseudogene predicted gene 8793
Nkain2 10 31689310 to 32890462 1201152 - protein coding gene Na+/K+ transporting ATPase interacting 2
Tssr97210 10 31690582 to 31690587 5 - TSS region transcription start site region 97210
Gm47704 10 31867912 to 31871101 3189 + unclassified gene predicted gene, 47704
Gm18189 10 31971719 to 31973669 1950 - pseudogene predicted gene, 18189
Tssr92884 10 31976743 to 31976752 9 + TSS region transcription start site region 92884
Tssr97211 10 32051203 to 32051209 6 - TSS region transcription start site region 97211
2900052O17Rik 10 32097536 to 32098348 812 unclassified gene RIKEN cDNA 2900052O17 gene
A230081H15Rik 10 32263611 to 32266539 2928 - unclassified gene Riken cDNA A230081H15 gene
C030006N10Rik 10 32279177 to 32279693 516 - unclassified gene RIKEN cDNA C030006N10 gene
Gm18704 10 32369555 to 32370292 737 - pseudogene predicted gene, 18704
D10Mit191 10 32462429 to 32462725 296 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 191
Tssr97212 10 32478762 to 32478765 3 - TSS region transcription start site region 97212
Gm47700 10 32484490 to 32486999 2509 - unclassified gene predicted gene, 47700
Tssr97213 10 32552514 to 32552517 3 - TSS region transcription start site region 97213
Tssr97214 10 32578337 to 32578342 5 - TSS region transcription start site region 97214
Gm47702 10 32638831 to 32639486 655 - unclassified gene predicted gene, 47702
2900009I19Rik 10 32660805 to 32661339 534 unclassified gene RIKEN cDNA 2900009I19 gene
Tssr97215 10 32755624 to 32755628 4 - TSS region transcription start site region 97215
Tssr97216 10 32889674 to 32889727 53 - TSS region transcription start site region 97216
Cpgi1427 10 32889690 to 32890739 1049 CpG island CpG island 1427
Tssr92885 10 32889809 to 32889821 12 + TSS region transcription start site region 92885
Tssr97217 10 32889903 to 32889919 16 - TSS region transcription start site region 97217
Tssr97218 10 32889971 to 32889996 25 - TSS region transcription start site region 97218
Tssr97219 10 32890001 to 32890027 26 - TSS region transcription start site region 97219
Tssr97220 10 32890080 to 32890172 92 - TSS region transcription start site region 97220
Gm47823 10 32917208 to 32939685 22477 - lincRNA gene predicted gene, 47823
Tssr92886 10 33083140 to 33083154 14 + TSS region transcription start site region 92886
Tssr92887 10 33083157 to 33083197 40 + TSS region transcription start site region 92887
Tssr92888 10 33083203 to 33083214 11 + TSS region transcription start site region 92888
Tssr92889 10 33083225 to 33083234 9 + TSS region transcription start site region 92889
Tssr92890 10 33083244 to 33083264 20 + TSS region transcription start site region 92890
Tssr92891 10 33083476 to 33083567 91 + TSS region transcription start site region 92891
Trdn 10 33083483 to 33476709 393226 + protein coding gene triadin
Tssr92892 10 33091412 to 33091417 5 + TSS region transcription start site region 92892
Tssr92893 10 33139112 to 33139124 12 + TSS region transcription start site region 92893
Tssr92894 10 33139192 to 33139212 20 + TSS region transcription start site region 92894
Tssr92895 10 33157065 to 33157112 47 + TSS region transcription start site region 92895
Tssr92896 10 33157127 to 33157141 14 + TSS region transcription start site region 92896
Tssr92897 10 33158244 to 33158250 6 + TSS region transcription start site region 92897
Gm47831 10 33171710 to 33172486 776 + unclassified gene predicted gene, 47831
Tssr92898 10 33175786 to 33175801 15 + TSS region transcription start site region 92898
Tssr92899 10 33195946 to 33195957 11 + TSS region transcription start site region 92899
Tssr92900 10 33195969 to 33195976 7 + TSS region transcription start site region 92900
Tssr92901 10 33196015 to 33196026 11 + TSS region transcription start site region 92901
Tssr92902 10 33197362 to 33197369 7 + TSS region transcription start site region 92902
Tssr92903 10 33197717 to 33197729 12 + TSS region transcription start site region 92903
Tssr92904 10 33197769 to 33197783 14 + TSS region transcription start site region 92904
Tssr92905 10 33197824 to 33197840 16 + TSS region transcription start site region 92905