Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:30843526-31483632

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi1423 10 30843946 to 30844529 583 CpG island CpG island 1423
Gm48862 10 30880517 to 30880850 333 + pseudogene predicted gene, 48862
Gm24168 10 30942379 to 30942485 106 - snRNA gene predicted gene, 24168
Tssr97200 10 30978753 to 30978755 2 - TSS region transcription start site region 97200
Gm30676 10 31029203 to 31066231 37028 - lincRNA gene predicted gene, 30676
Gm23790 10 31163526 to 31163632 106 - snRNA gene predicted gene, 23790
Gm7333 10 31209273 to 31210332 1059 + pseudogene predicted gene 7333
Gm5422 10 31248137 to 31251043 2906 + pseudogene predicted pseudogene 5422
D10Mit253 10 31257862 to 31257987 125 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 253
Cpgi1424 10 31313201 to 31314020 819 CpG island CpG island 1424
Hddc2 10 31313367 to 31328086 14719 + protein coding gene HD domain containing 2
Tssr92880 10 31313375 to 31313420 45 + TSS region transcription start site region 92880
Tssr92881 10 31313431 to 31313442 11 + TSS region transcription start site region 92881
Tssr92882 10 31313447 to 31313452 5 + TSS region transcription start site region 92882
n-R5s76 10 31317169 to 31317281 112 - rRNA gene nuclear encoded rRNA 5S 76
Gm48865 10 31321418 to 31324022 2604 + unclassified gene predicted gene, 48865
Tpd52l1 10 31332376 to 31445958 113582 - protein coding gene tumor protein D52-like 1
D730042M07Rik 10 31372419 to 31373009 590 unclassified gene RIKEN cDNA D730042M07 gene
Tssr97201 10 31390453 to 31390459 6 - TSS region transcription start site region 97201
Tssr92883 10 31391348 to 31391349 1 + TSS region transcription start site region 92883
Gm48094 10 31398923 to 31414401 15478 + antisense lncRNA gene predicted gene, 48094
Supt4b 10 31413815 to 31414165 350 - protein coding gene suppressor of Ty 4B
Gm48092 10 31423529 to 31426090 2561 - unclassified gene predicted gene, 48092
Gm48093 10 31429993 to 31433506 3513 + antisense lncRNA gene predicted gene, 48093
D10Mit284 10 31443581 to 31443690 109 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 284
Cpgi1425 10 31445195 to 31446178 983 CpG island CpG island 1425
Tssr97202 10 31445802 to 31445848 46 - TSS region transcription start site region 97202
Tssr97203 10 31445849 to 31445894 45 - TSS region transcription start site region 97203
Tssr97204 10 31445943 to 31445967 24 - TSS region transcription start site region 97204
Gm47687 10 31448257 to 31452082 3825 - unclassified gene predicted gene, 47687