Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:30393133-31293163

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40622 10 30450520 to 30451703 1183 + lncRNA gene predicted gene, 40622
Gm22623 10 30493942 to 30494048 106 + snRNA gene predicted gene, 22623
Gm48232 10 30511760 to 30514123 2363 - unclassified gene predicted gene, 48232
Gm48233 10 30530914 to 30532030 1116 - unclassified gene predicted gene, 48233
Trmt11 10 30534225 to 30600749 66524 - protein coding gene tRNA methyltransferase 11
Tssr97171 10 30552153 to 30552154 1 - TSS region transcription start site region 97171
Cpgi1419 10 30600147 to 30600959 812 CpG island CpG island 1419
Tssr97172 10 30600662 to 30600701 39 - TSS region transcription start site region 97172
Gm20300 10 30603195 to 30606634 3439 - lincRNA gene predicted gene, 20300
Hint3 10 30608207 to 30629401 21194 - protein coding gene histidine triad nucleotide binding protein 3
Cpgi1420 10 30618067 to 30618694 627 CpG island CpG island 1420
Tssr97173 10 30618340 to 30618395 55 - TSS region transcription start site region 97173
Tssr97174 10 30618417 to 30618428 11 - TSS region transcription start site region 97174
Tssr97175 10 30618436 to 30618473 37 - TSS region transcription start site region 97175
Tssr97176 10 30618483 to 30618494 11 - TSS region transcription start site region 97176
Tssr97177 10 30623532 to 30623537 5 - TSS region transcription start site region 97177
Tssr97178 10 30628499 to 30628505 6 - TSS region transcription start site region 97178
Tssr97179 10 30629648 to 30629653 5 - TSS region transcription start site region 97179
Ncoa7 10 30645582 to 30803360 157778 - protein coding gene nuclear receptor coactivator 7
Tssr97180 10 30647064 to 30647077 13 - TSS region transcription start site region 97180
Tssr97181 10 30655724 to 30655729 5 - TSS region transcription start site region 97181
Tssr97182 10 30655753 to 30655762 9 - TSS region transcription start site region 97182
Tssr97183 10 30655773 to 30655810 37 - TSS region transcription start site region 97183
Tssr97184 10 30655841 to 30655852 11 - TSS region transcription start site region 97184
Tssr97185 10 30655859 to 30655868 9 - TSS region transcription start site region 97185
Gm24189 10 30673134 to 30673227 93 - rRNA gene predicted gene, 24189
Tssr97186 10 30700056 to 30700061 5 - TSS region transcription start site region 97186
Gm48335 10 30740152 to 30743962 3810 - unclassified gene predicted gene, 48335
Tssr97187 10 30745845 to 30745888 43 - TSS region transcription start site region 97187
Tssr97188 10 30763557 to 30763561 4 - TSS region transcription start site region 97188
Gm48334 10 30768799 to 30769575 776 - unclassified gene predicted gene, 48334
Tssr97189 10 30771842 to 30771851 9 - TSS region transcription start site region 97189
Tssr97190 10 30771884 to 30771921 37 - TSS region transcription start site region 97190
Gm5171 10 30780857 to 30782271 1414 - pseudogene predicted gene 5171
Tssr97191 10 30793309 to 30793313 4 - TSS region transcription start site region 97191
Cpgi1421 10 30802545 to 30803739 1194 CpG island CpG island 1421
Tssr97192 10 30802854 to 30802865 11 - TSS region transcription start site region 97192
Tssr97193 10 30802884 to 30802946 62 - TSS region transcription start site region 97193
Tssr97194 10 30803075 to 30803154 79 - TSS region transcription start site region 97194
Tssr97195 10 30803285 to 30803376 91 - TSS region transcription start site region 97195
n-TEctc9 10 30811140 to 30811211 71 + tRNA gene nuclear encoded tRNA glutamic acid 9 (anticodon CTC)
Gm30618 10 30819685 to 30828396 8711 + lncRNA gene predicted gene, 30618
Hey2 10 30832359 to 30842783 10424 - protein coding gene hairy/enhancer-of-split related with YRPW motif 2
Tssr97196 10 30837892 to 30837911 19 - TSS region transcription start site region 97196
Cpgi1422 10 30842179 to 30843475 1296 CpG island CpG island 1422
Tssr97197 10 30842765 to 30842791 26 - TSS region transcription start site region 97197
Tssr97198 10 30842811 to 30842831 20 - TSS region transcription start site region 97198
Tssr97199 10 30843133 to 30843163 30 - TSS region transcription start site region 97199
Cpgi1423 10 30843946 to 30844529 583 CpG island CpG island 1423
Gm48862 10 30880517 to 30880850 333 + pseudogene predicted gene, 48862
Gm24168 10 30942379 to 30942485 106 - snRNA gene predicted gene, 24168
Tssr97200 10 30978753 to 30978755 2 - TSS region transcription start site region 97200
Gm30676 10 31029203 to 31066231 37028 - lincRNA gene predicted gene, 30676
Gm23790 10 31163526 to 31163632 106 - snRNA gene predicted gene, 23790
Gm7333 10 31209273 to 31210332 1059 + pseudogene predicted gene 7333
Gm5422 10 31248137 to 31251043 2906 + pseudogene predicted pseudogene 5422
D10Mit253 10 31257862 to 31257987 125 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 253