Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:29433943-30534068

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Igan1 10 17842565 to 29828159 11985594 QTL IgA nephropathy 1
Rspo3 10 29453106 to 29535867 82761 - protein coding gene R-spondin 3
Gm20276 10 29490774 to 29493421 2647 - unclassified gene predicted gene, 20276
Cpgi1415 10 29533529 to 29533733 204 CpG island CpG island 1415
Cpgi1416 10 29534476 to 29534773 297 CpG island CpG island 1416
Gm48159 10 29534717 to 29614471 79754 + antisense lncRNA gene predicted gene, 48159
Tssr92878 10 29535121 to 29535122 1 + TSS region transcription start site region 92878
Cpgi1417 10 29535422 to 29536139 717 CpG island CpG island 1417
Tssr97164 10 29535787 to 29535801 14 - TSS region transcription start site region 97164
Tssr97165 10 29535807 to 29535849 42 - TSS region transcription start site region 97165
Tssr97166 10 29535857 to 29535880 23 - TSS region transcription start site region 97166
Gm46197 10 29614161 to 29614576 415 - pseudogene predicted gene, 46197
Gm46219 10 29693117 to 29702624 9507 - lncRNA gene predicted gene, 46219
Gm10275 10 29698746 to 29699379 633 - pseudogene predicted pseudogene 10275
Tssr97167 10 29699379 to 29699382 3 - TSS region transcription start site region 97167
Gm6390 10 29781411 to 29781999 588 + pseudogene predicted gene 6390
D10Mit85 10 29828023 to 29828159 136 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 85
D10Mit137 10 29983943 to 29984068 125 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 137
Gm48215 10 29984178 to 30004378 20200 - lincRNA gene predicted gene, 48215
Tssr92879 10 30010894 to 30010925 31 + TSS region transcription start site region 92879
Gm232 10 30011295 to 30017295 6000 + pseudogene predicted gene 232
D10Mit19 10 30022159 to 30022282 123 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 19
Gm8767 10 30084265 to 30085334 1069 - pseudogene predicted gene 8767
Gm2829 10 30179726 to 30180224 498 + pseudogene predicted gene 2829
Cenpw 10 30196009 to 30200604 4595 - protein coding gene centromere protein W
Cpgi1418 10 30200160 to 30200751 591 CpG island CpG island 1418
Tssr97168 10 30200492 to 30200542 50 - TSS region transcription start site region 97168
Tssr97169 10 30200547 to 30200573 26 - TSS region transcription start site region 97169
Tssr97170 10 30200594 to 30200605 11 - TSS region transcription start site region 97170
Gm4780 10 30373222 to 30374713 1491 + pseudogene predicted gene 4780
Gm40622 10 30450520 to 30451703 1183 + lncRNA gene predicted gene, 40622
Gm22623 10 30493942 to 30494048 106 + snRNA gene predicted gene, 22623
Gm48232 10 30511760 to 30514123 2363 - unclassified gene predicted gene, 48232
Gm48233 10 30530914 to 30532030 1116 - unclassified gene predicted gene, 48233