Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:29314379-30084382

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Igan1 10 17842565 to 29828159 11985594 QTL IgA nephropathy 1
Echdc1 10 29313166 to 29347469 34303 + protein coding gene enoyl Coenzyme A hydratase domain containing 1
Rnf146 10 29344176 to 29362442 18266 - protein coding gene ring finger protein 146
Gm25596 10 29349585 to 29349691 106 + snRNA gene predicted gene, 25596
Gm47483 10 29351879 to 29353893 2014 - unclassified gene predicted gene, 47483
Tssr3172 10 29357770 to 29357777 7 + TSS region transcription start site region 3172
Tssr97161 10 29361346 to 29361351 5 - TSS region transcription start site region 97161
Cpgi1414 10 29361391 to 29362475 1084 CpG island CpG island 1414
Gm30698 10 29361396 to 29362623 1227 + protein coding gene predicted gene, 30698
Tssr97162 10 29362012 to 29362029 17 - TSS region transcription start site region 97162
Tssr97163 10 29362032 to 29362075 43 - TSS region transcription start site region 97163
Gm40621 10 29367610 to 29375529 7919 + lincRNA gene predicted gene, 40621
Gm24286 10 29395036 to 29395163 127 + snoRNA gene predicted gene, 24286
Gm18903 10 29426346 to 29426904 558 + pseudogene predicted gene, 18903
Rspo3 10 29453106 to 29535867 82761 - protein coding gene R-spondin 3
Gm20276 10 29490774 to 29493421 2647 - unclassified gene predicted gene, 20276
Cpgi1415 10 29533529 to 29533733 204 CpG island CpG island 1415
Cpgi1416 10 29534476 to 29534773 297 CpG island CpG island 1416
Gm48159 10 29534717 to 29614471 79754 + antisense lncRNA gene predicted gene, 48159
Tssr92878 10 29535121 to 29535122 1 + TSS region transcription start site region 92878
Cpgi1417 10 29535422 to 29536139 717 CpG island CpG island 1417
Tssr97164 10 29535787 to 29535801 14 - TSS region transcription start site region 97164
Tssr97165 10 29535807 to 29535849 42 - TSS region transcription start site region 97165
Tssr97166 10 29535857 to 29535880 23 - TSS region transcription start site region 97166
Gm46197 10 29614161 to 29614576 415 - pseudogene predicted gene, 46197
Gm46219 10 29693117 to 29702624 9507 - lncRNA gene predicted gene, 46219
Gm10275 10 29698746 to 29699379 633 - pseudogene predicted pseudogene 10275
Tssr97167 10 29699379 to 29699382 3 - TSS region transcription start site region 97167
Gm6390 10 29781411 to 29781999 588 + pseudogene predicted gene 6390
D10Mit85 10 29828023 to 29828159 136 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 85
D10Mit137 10 29983943 to 29984068 125 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 137
Gm48215 10 29984178 to 30004378 20200 - lincRNA gene predicted gene, 48215
Tssr92879 10 30010894 to 30010925 31 + TSS region transcription start site region 92879
Gm232 10 30011295 to 30017295 6000 + pseudogene predicted gene 232
D10Mit19 10 30022159 to 30022282 123 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 19
Gm8767 10 30084265 to 30085334 1069 - pseudogene predicted gene 8767