Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:29163525-29463594

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Soga3 10 29143839 to 29199630 55791 + protein coding gene SOGA family member 3
Cpgi1412 10 29196496 to 29197532 1036 CpG island CpG island 1412
Gm49353 10 29198954 to 29221940 22986 + protein coding gene predicted gene, 49353
Tssr92867 10 29200597 to 29200614 17 + TSS region transcription start site region 92867
Tssr92868 10 29200815 to 29200853 38 + TSS region transcription start site region 92868
4832406H04Rik 10 29206263 to 29210920 4657 unclassified gene RIKEN cDNA 4832406H04 gene
9330159F19Rik 10 29211606 to 29230779 19173 + protein coding gene RIKEN cDNA 9330159F19 gene
Tssr92869 10 29211637 to 29211649 12 + TSS region transcription start site region 92869
Tssr92870 10 29211662 to 29211700 38 + TSS region transcription start site region 92870
Tssr92871 10 29211775 to 29211805 30 + TSS region transcription start site region 92871
Tssr92872 10 29216016 to 29216021 5 + TSS region transcription start site region 92872
Gm40620 10 29287247 to 29290497 3250 - lncRNA gene predicted gene, 40620
Gm46218 10 29297934 to 29313825 15891 - antisense lncRNA gene predicted gene, 46218
Tssr92873 10 29310988 to 29310995 7 + TSS region transcription start site region 92873
Cpgi1413 10 29313122 to 29313694 572 CpG island CpG island 1413
Tssr92874 10 29313164 to 29313221 57 + TSS region transcription start site region 92874
Echdc1 10 29313166 to 29347469 34303 + protein coding gene enoyl Coenzyme A hydratase domain containing 1
Tssr92875 10 29313227 to 29313238 11 + TSS region transcription start site region 92875
Tssr97160 10 29313375 to 29313409 34 - TSS region transcription start site region 97160
Tssr92876 10 29313525 to 29313594 69 + TSS region transcription start site region 92876
Tssr92877 10 29313621 to 29313630 9 + TSS region transcription start site region 92877
Rnf146 10 29344176 to 29362442 18266 - protein coding gene ring finger protein 146
Gm25596 10 29349585 to 29349691 106 + snRNA gene predicted gene, 25596
Gm47483 10 29351879 to 29353893 2014 - unclassified gene predicted gene, 47483
Tssr3172 10 29357770 to 29357777 7 + TSS region transcription start site region 3172
Tssr97161 10 29361346 to 29361351 5 - TSS region transcription start site region 97161
Cpgi1414 10 29361391 to 29362475 1084 CpG island CpG island 1414
Gm30698 10 29361396 to 29362623 1227 + protein coding gene predicted gene, 30698
Tssr97162 10 29362012 to 29362029 17 - TSS region transcription start site region 97162
Tssr97163 10 29362032 to 29362075 43 - TSS region transcription start site region 97163
Gm40621 10 29367610 to 29375529 7919 + lincRNA gene predicted gene, 40621
Gm24286 10 29395036 to 29395163 127 + snoRNA gene predicted gene, 24286
Gm18903 10 29426346 to 29426904 558 + pseudogene predicted gene, 18903
Rspo3 10 29453106 to 29535867 82761 - protein coding gene R-spondin 3