Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:28979090-29309276

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
2310057J18Rik 10 28972288 to 28986303 14015 - protein coding gene RIKEN cDNA 2310057J18 gene
Tssr97153 10 28985314 to 28985323 9 - TSS region transcription start site region 97153
Tssr97154 10 28985379 to 28985385 6 - TSS region transcription start site region 97154
Tssr97155 10 28986209 to 28986259 50 - TSS region transcription start site region 97155
Tssr97156 10 28986280 to 28986313 33 - TSS region transcription start site region 97156
Tssr97157 10 28986331 to 28986344 13 - TSS region transcription start site region 97157
Gm18508 10 28988799 to 28990440 1641 - pseudogene predicted gene, 18508
Tssr92858 10 29030069 to 29030118 49 + TSS region transcription start site region 92858
Gm9824 10 29030128 to 29030688 560 + pseudogene predicted pseudogene 9824
Tssr92859 10 29030737 to 29030761 24 + TSS region transcription start site region 92859
Gm30619 10 29032131 to 29035452 3321 - pseudogene predicted gene, 30619
Tssr97158 10 29035459 to 29035463 4 - TSS region transcription start site region 97158
Tssr97159 10 29052236 to 29052240 4 - TSS region transcription start site region 97159
Gm9996 10 29143282 to 29144194 912 - protein coding gene predicted gene 9996
Cpgi1408 10 29143540 to 29143750 210 CpG island CpG island 1408
Tssr92860 10 29143649 to 29143720 71 + TSS region transcription start site region 92860
Tssr92861 10 29143722 to 29143732 10 + TSS region transcription start site region 92861
Soga3 10 29143839 to 29199630 55791 + protein coding gene SOGA family member 3
Cpgi1409 10 29144090 to 29144276 186 CpG island CpG island 1409
Tssr92862 10 29144113 to 29144126 13 + TSS region transcription start site region 92862
Tssr92863 10 29144129 to 29144164 35 + TSS region transcription start site region 92863
Tssr92864 10 29144218 to 29144229 11 + TSS region transcription start site region 92864
Cpgi1410 10 29146560 to 29147712 1152 CpG island CpG island 1410
Tssr92865 10 29146699 to 29146741 42 + TSS region transcription start site region 92865
Tssr92866 10 29147206 to 29147282 76 + TSS region transcription start site region 92866
Cpgi1411 10 29148103 to 29148485 382 CpG island CpG island 1411
D10Mit3 10 29152186 to 29152428 242 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 3
Mop2 10 29152428 to 9413375 -19739053 QTL morphine preference 2
Cpgi1412 10 29196496 to 29197532 1036 CpG island CpG island 1412
Gm49353 10 29198954 to 29221940 22986 + protein coding gene predicted gene, 49353
Tssr92867 10 29200597 to 29200614 17 + TSS region transcription start site region 92867
Tssr92868 10 29200815 to 29200853 38 + TSS region transcription start site region 92868
4832406H04Rik 10 29206263 to 29210920 4657 unclassified gene RIKEN cDNA 4832406H04 gene
9330159F19Rik 10 29211606 to 29230779 19173 + protein coding gene RIKEN cDNA 9330159F19 gene
Tssr92869 10 29211637 to 29211649 12 + TSS region transcription start site region 92869
Tssr92870 10 29211662 to 29211700 38 + TSS region transcription start site region 92870
Tssr92871 10 29211775 to 29211805 30 + TSS region transcription start site region 92871
Tssr92872 10 29216016 to 29216021 5 + TSS region transcription start site region 92872
Gm40620 10 29287247 to 29290497 3250 - lncRNA gene predicted gene, 40620
Gm46218 10 29297934 to 29313825 15891 - antisense lncRNA gene predicted gene, 46218