Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:28825379-29145385

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Themis 10 28668360 to 28883818 215458 + protein coding gene thymocyte selection associated
Tssr92847 10 28827116 to 28827121 5 + TSS region transcription start site region 92847
Tssr92848 10 28827404 to 28827413 9 + TSS region transcription start site region 92848
Tssr92849 10 28836731 to 28836735 4 + TSS region transcription start site region 92849
Tssr92850 10 28837555 to 28837559 4 + TSS region transcription start site region 92850
Tssr92851 10 28837790 to 28837794 4 + TSS region transcription start site region 92851
Tssr92852 10 28843945 to 28843954 9 + TSS region transcription start site region 92852
Tssr92853 10 28843981 to 28843997 16 + TSS region transcription start site region 92853
Tssr92854 10 28844006 to 28844019 13 + TSS region transcription start site region 92854
Tssr92855 10 28844053 to 28844068 15 + TSS region transcription start site region 92855
A430036H03Rik 10 28857153 to 28861513 4360 unclassified gene RIKEN cDNA A430036H03 gene
Tssr92856 10 28863562 to 28863603 41 + TSS region transcription start site region 92856
Tssr92857 10 28874021 to 28874024 3 + TSS region transcription start site region 92857
Gm47835 10 28920497 to 28921142 645 + pseudogene predicted gene, 47835
4930519F09Rik 10 28921963 to 28923507 1544 - pseudogene RIKEN cDNA 4930519F09 gene
Gm22811 10 28954149 to 28954302 153 - ribozyme gene predicted gene, 22811
2310057J18Rik 10 28972288 to 28986303 14015 - protein coding gene RIKEN cDNA 2310057J18 gene
Tssr97152 10 28973964 to 28973968 4 - TSS region transcription start site region 97152
Tssr97153 10 28985314 to 28985323 9 - TSS region transcription start site region 97153
Tssr97154 10 28985379 to 28985385 6 - TSS region transcription start site region 97154
Tssr97155 10 28986209 to 28986259 50 - TSS region transcription start site region 97155
Tssr97156 10 28986280 to 28986313 33 - TSS region transcription start site region 97156
Tssr97157 10 28986331 to 28986344 13 - TSS region transcription start site region 97157
Gm18508 10 28988799 to 28990440 1641 - pseudogene predicted gene, 18508
Tssr92858 10 29030069 to 29030118 49 + TSS region transcription start site region 92858
Gm9824 10 29030128 to 29030688 560 + pseudogene predicted pseudogene 9824
Tssr92859 10 29030737 to 29030761 24 + TSS region transcription start site region 92859
Gm30619 10 29032131 to 29035452 3321 - pseudogene predicted gene, 30619
Tssr97158 10 29035459 to 29035463 4 - TSS region transcription start site region 97158
Tssr97159 10 29052236 to 29052240 4 - TSS region transcription start site region 97159
Gm9996 10 29143282 to 29144194 912 - protein coding gene predicted gene 9996
Cpgi1408 10 29143540 to 29143750 210 CpG island CpG island 1408
Tssr92860 10 29143649 to 29143720 71 + TSS region transcription start site region 92860
Tssr92861 10 29143722 to 29143732 10 + TSS region transcription start site region 92861
Soga3 10 29143839 to 29199630 55791 + protein coding gene SOGA family member 3
Cpgi1409 10 29144090 to 29144276 186 CpG island CpG island 1409
Tssr92862 10 29144113 to 29144126 13 + TSS region transcription start site region 92862
Tssr92863 10 29144129 to 29144164 35 + TSS region transcription start site region 92863
Tssr92864 10 29144218 to 29144229 11 + TSS region transcription start site region 92864