Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:27158274-28398891

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lama2 10 26981285 to 27617191 635906 - protein coding gene laminin, alpha 2
Gm17917 10 27280725 to 27281670 945 + pseudogene predicted gene, 17917
Gm48083 10 27293295 to 27293659 364 + pseudogene predicted gene, 48083
4930579H20Rik 10 27389866 to 27397225 7359 + antisense lncRNA gene RIKEN cDNA 4930579H20 gene
Gm23353 10 27452289 to 27452360 71 + snoRNA gene predicted gene, 23353
Tssr97143 10 27525964 to 27525969 5 - TSS region transcription start site region 97143
Gm36962 10 27613568 to 27615328 1760 - unclassified gene predicted gene, 36962
Cpgi1405 10 27616657 to 27616844 187 CpG island CpG island 1405
Tssr97144 10 27616805 to 27616814 9 - TSS region transcription start site region 97144
Tssr97145 10 27616815 to 27616825 10 - TSS region transcription start site region 97145
Tssr97146 10 27616831 to 27616891 60 - TSS region transcription start site region 97146
Tssr97147 10 27616895 to 27616904 9 - TSS region transcription start site region 97147
Tssr97148 10 27616929 to 27616937 8 - TSS region transcription start site region 97148
Tssr97149 10 27617019 to 27617047 28 - TSS region transcription start site region 97149
Gm30165 10 27631982 to 27671766 39784 - lincRNA gene predicted gene, 30165
Gm30228 10 27745853 to 27809696 63843 - lincRNA gene predicted gene, 30228
Gm18041 10 27778274 to 27778891 617 + pseudogene predicted gene, 18041
Gm47696 10 27784244 to 27784643 399 - pseudogene predicted gene, 47696
Gm18972 10 27870091 to 27870720 629 + pseudogene predicted gene, 18972
D10Mit251 10 27927637 to 27927752 115 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 251
Tssr92812 10 27936328 to 27936333 5 + TSS region transcription start site region 92812
Gm10145 10 27936364 to 27936825 461 + pseudogene predicted gene 10145
Tssr97150 10 27991076 to 27991114 38 - TSS region transcription start site region 97150
Tssr97151 10 28013357 to 28013399 42 - TSS region transcription start site region 97151
Tssr92813 10 28013492 to 28013502 10 + TSS region transcription start site region 92813
Gm18507 10 28065666 to 28066190 524 - pseudogene predicted gene, 18507
Cpgi1406 10 28074212 to 28075576 1364 CpG island CpG island 1406
Tssr92814 10 28074813 to 28074873 60 + TSS region transcription start site region 92814
Ptprk 10 28074820 to 28597397 522577 + protein coding gene protein tyrosine phosphatase, receptor type, K
Tssr92815 10 28074916 to 28074927 11 + TSS region transcription start site region 92815
Tssr92816 10 28074928 to 28074937 9 + TSS region transcription start site region 92816
Cpgi1407 10 28075831 to 28076539 708 CpG island CpG island 1407
Tssr92817 10 28089230 to 28089240 10 + TSS region transcription start site region 92817
Tssr92818 10 28185333 to 28185337 4 + TSS region transcription start site region 92818
Gm22370 10 28214039 to 28214121 82 - miRNA gene predicted gene, 22370
Tssr92819 10 28247786 to 28247791 5 + TSS region transcription start site region 92819
Tssr92820 10 28277275 to 28277278 3 + TSS region transcription start site region 92820