Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:27150666-28981190

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lama2 10 26981285 to 27617191 635906 - protein coding gene laminin, alpha 2
Gm17917 10 27280725 to 27281670 945 + pseudogene predicted gene, 17917
Gm48083 10 27293295 to 27293659 364 + pseudogene predicted gene, 48083
4930579H20Rik 10 27389866 to 27397225 7359 + antisense lncRNA gene RIKEN cDNA 4930579H20 gene
Gm23353 10 27452289 to 27452360 71 + snoRNA gene predicted gene, 23353
Tssr97143 10 27525964 to 27525969 5 - TSS region transcription start site region 97143
Gm36962 10 27613568 to 27615328 1760 - unclassified gene predicted gene, 36962
Cpgi1405 10 27616657 to 27616844 187 CpG island CpG island 1405
Tssr97144 10 27616805 to 27616814 9 - TSS region transcription start site region 97144
Tssr97145 10 27616815 to 27616825 10 - TSS region transcription start site region 97145
Tssr97146 10 27616831 to 27616891 60 - TSS region transcription start site region 97146
Tssr97147 10 27616895 to 27616904 9 - TSS region transcription start site region 97147
Tssr97148 10 27616929 to 27616937 8 - TSS region transcription start site region 97148
Tssr97149 10 27617019 to 27617047 28 - TSS region transcription start site region 97149
Gm30165 10 27631982 to 27671766 39784 - lincRNA gene predicted gene, 30165
Gm30228 10 27745853 to 27809696 63843 - lincRNA gene predicted gene, 30228
Gm18041 10 27778274 to 27778891 617 + pseudogene predicted gene, 18041
Gm47696 10 27784244 to 27784643 399 - pseudogene predicted gene, 47696
Gm18972 10 27870091 to 27870720 629 + pseudogene predicted gene, 18972
D10Mit251 10 27927637 to 27927752 115 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 251
Tssr92812 10 27936328 to 27936333 5 + TSS region transcription start site region 92812
Gm10145 10 27936364 to 27936825 461 + pseudogene predicted gene 10145
Tssr97150 10 27991076 to 27991114 38 - TSS region transcription start site region 97150
Tssr97151 10 28013357 to 28013399 42 - TSS region transcription start site region 97151
Tssr92813 10 28013492 to 28013502 10 + TSS region transcription start site region 92813
Gm18507 10 28065666 to 28066190 524 - pseudogene predicted gene, 18507
Cpgi1406 10 28074212 to 28075576 1364 CpG island CpG island 1406
Tssr92814 10 28074813 to 28074873 60 + TSS region transcription start site region 92814
Ptprk 10 28074820 to 28597397 522577 + protein coding gene protein tyrosine phosphatase, receptor type, K
Tssr92815 10 28074916 to 28074927 11 + TSS region transcription start site region 92815
Tssr92816 10 28074928 to 28074937 9 + TSS region transcription start site region 92816
Cpgi1407 10 28075831 to 28076539 708 CpG island CpG island 1407
Tssr92817 10 28089230 to 28089240 10 + TSS region transcription start site region 92817
Tssr92818 10 28185333 to 28185337 4 + TSS region transcription start site region 92818
Gm22370 10 28214039 to 28214121 82 - miRNA gene predicted gene, 22370
Tssr92819 10 28247786 to 28247791 5 + TSS region transcription start site region 92819
Tssr92820 10 28277275 to 28277278 3 + TSS region transcription start site region 92820
Tssr92821 10 28498768 to 28498786 18 + TSS region transcription start site region 92821
Tssr92822 10 28586730 to 28586771 41 + TSS region transcription start site region 92822
Tssr92823 10 28611944 to 28611945 1 + TSS region transcription start site region 92823
Tssr92824 10 28611947 to 28611955 8 + TSS region transcription start site region 92824
Themis 10 28668360 to 28883818 215458 + protein coding gene thymocyte selection associated
Tssr92825 10 28668388 to 28668404 16 + TSS region transcription start site region 92825
Tssr92826 10 28668453 to 28668458 5 + TSS region transcription start site region 92826
Tssr92827 10 28668462 to 28668477 15 + TSS region transcription start site region 92827
Tssr92828 10 28668489 to 28668498 9 + TSS region transcription start site region 92828
Tssr92829 10 28668545 to 28668552 7 + TSS region transcription start site region 92829
Tssr92830 10 28668560 to 28668637 77 + TSS region transcription start site region 92830
Tssr92831 10 28668648 to 28668652 4 + TSS region transcription start site region 92831
Tssr92832 10 28672277 to 28672306 29 + TSS region transcription start site region 92832
A130091G23Rik 10 28681643 to 28685113 3470 unclassified gene RIKEN cDNA A130091G23 gene
Tssr3170 10 28697612 to 28697615 3 + TSS region transcription start site region 3170
Tssr92833 10 28730813 to 28730819 6 + TSS region transcription start site region 92833
Tssr92834 10 28736130 to 28736144 14 + TSS region transcription start site region 92834
Tssr92835 10 28744477 to 28744481 4 + TSS region transcription start site region 92835
Tssr3171 10 28747513 to 28747558 45 + TSS region transcription start site region 3171
A130096G17Rik 10 28748242 to 28752319 4077 unclassified gene RIKEN cDNA A130096G17 gene
Tssr92836 10 28757208 to 28757213 5 + TSS region transcription start site region 92836
Tssr92837 10 28784963 to 28784980 17 + TSS region transcription start site region 92837
Tssr92838 10 28791580 to 28791603 23 + TSS region transcription start site region 92838
Tssr92839 10 28791667 to 28791678 11 + TSS region transcription start site region 92839
Tssr92840 10 28791684 to 28791707 23 + TSS region transcription start site region 92840
Tssr92841 10 28793536 to 28793544 8 + TSS region transcription start site region 92841
Gm47834 10 28806294 to 28806756 462 - pseudogene predicted gene, 47834
Tssr92842 10 28807574 to 28807585 11 + TSS region transcription start site region 92842
Tssr92843 10 28808888 to 28808893 5 + TSS region transcription start site region 92843
Tssr92844 10 28809042 to 28809053 11 + TSS region transcription start site region 92844
Tssr92845 10 28823064 to 28823067 3 + TSS region transcription start site region 92845
Tssr92846 10 28824303 to 28824315 12 + TSS region transcription start site region 92846
Tssr92847 10 28827116 to 28827121 5 + TSS region transcription start site region 92847
Tssr92848 10 28827404 to 28827413 9 + TSS region transcription start site region 92848
Tssr92849 10 28836731 to 28836735 4 + TSS region transcription start site region 92849
Tssr92850 10 28837555 to 28837559 4 + TSS region transcription start site region 92850
Tssr92851 10 28837790 to 28837794 4 + TSS region transcription start site region 92851
Tssr92852 10 28843945 to 28843954 9 + TSS region transcription start site region 92852
Tssr92853 10 28843981 to 28843997 16 + TSS region transcription start site region 92853
Tssr92854 10 28844006 to 28844019 13 + TSS region transcription start site region 92854
Tssr92855 10 28844053 to 28844068 15 + TSS region transcription start site region 92855
A430036H03Rik 10 28857153 to 28861513 4360 unclassified gene RIKEN cDNA A430036H03 gene
Tssr92856 10 28863562 to 28863603 41 + TSS region transcription start site region 92856
Tssr92857 10 28874021 to 28874024 3 + TSS region transcription start site region 92857
Gm47835 10 28920497 to 28921142 645 + pseudogene predicted gene, 47835
4930519F09Rik 10 28921963 to 28923507 1544 - pseudogene RIKEN cDNA 4930519F09 gene
Gm22811 10 28954149 to 28954302 153 - ribozyme gene predicted gene, 22811
2310057J18Rik 10 28972288 to 28986303 14015 - protein coding gene RIKEN cDNA 2310057J18 gene
Tssr97152 10 28973964 to 28973968 4 - TSS region transcription start site region 97152