Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:26963274-28593891

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51 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arrd2 10 20407439 to 27014395 6606956 QTL age-related retinal degeneration 2
Gm48084 10 26949740 to 26982036 32296 + antisense lncRNA gene predicted gene, 48084
Gm30534 10 26966085 to 26966291 206 + protein coding gene predicted gene, 30534
Lama2 10 26981285 to 27617191 635906 - protein coding gene laminin, alpha 2
Gm40618 10 26982190 to 26983043 853 + lncRNA gene predicted gene, 40618
Alcp15 10 27014268 to 27014395 127 QTL alcohol preference locus 15, male specific
Alcp16 10 27014268 to 27014395 127 QTL alcohol preference locus 16, female specific
D10Mit126 10 27014268 to 27014395 127 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 126
Psrs1 10 27014268 to 46844387 19830119 QTL psoriasis susceptibility 1
Pas11 10 27014268 to 27014395 127 QTL pulmonary adenoma susceptibility 11
D10Mit126.1 10 27014424 to 27014545 121 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 126.1
Tssr3169 10 27127465 to 27127495 30 - TSS region transcription start site region 3169
Tssr97142 10 27134011 to 27134015 4 - TSS region transcription start site region 97142
Gm17917 10 27280725 to 27281670 945 + pseudogene predicted gene, 17917
Gm48083 10 27293295 to 27293659 364 + pseudogene predicted gene, 48083
4930579H20Rik 10 27389866 to 27397225 7359 + antisense lncRNA gene RIKEN cDNA 4930579H20 gene
Gm23353 10 27452289 to 27452360 71 + snoRNA gene predicted gene, 23353
Tssr97143 10 27525964 to 27525969 5 - TSS region transcription start site region 97143
Gm36962 10 27613568 to 27615328 1760 - unclassified gene predicted gene, 36962
Cpgi1405 10 27616657 to 27616844 187 CpG island CpG island 1405
Tssr97144 10 27616805 to 27616814 9 - TSS region transcription start site region 97144
Tssr97145 10 27616815 to 27616825 10 - TSS region transcription start site region 97145
Tssr97146 10 27616831 to 27616891 60 - TSS region transcription start site region 97146
Tssr97147 10 27616895 to 27616904 9 - TSS region transcription start site region 97147
Tssr97148 10 27616929 to 27616937 8 - TSS region transcription start site region 97148
Tssr97149 10 27617019 to 27617047 28 - TSS region transcription start site region 97149
Gm30165 10 27631982 to 27671766 39784 - lincRNA gene predicted gene, 30165
Gm30228 10 27745853 to 27809696 63843 - lincRNA gene predicted gene, 30228
Gm18041 10 27778274 to 27778891 617 + pseudogene predicted gene, 18041
Gm47696 10 27784244 to 27784643 399 - pseudogene predicted gene, 47696
Gm18972 10 27870091 to 27870720 629 + pseudogene predicted gene, 18972
D10Mit251 10 27927637 to 27927752 115 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 251
Tssr92812 10 27936328 to 27936333 5 + TSS region transcription start site region 92812
Gm10145 10 27936364 to 27936825 461 + pseudogene predicted gene 10145
Tssr97150 10 27991076 to 27991114 38 - TSS region transcription start site region 97150
Tssr97151 10 28013357 to 28013399 42 - TSS region transcription start site region 97151
Tssr92813 10 28013492 to 28013502 10 + TSS region transcription start site region 92813
Gm18507 10 28065666 to 28066190 524 - pseudogene predicted gene, 18507
Cpgi1406 10 28074212 to 28075576 1364 CpG island CpG island 1406
Tssr92814 10 28074813 to 28074873 60 + TSS region transcription start site region 92814
Ptprk 10 28074820 to 28597397 522577 + protein coding gene protein tyrosine phosphatase, receptor type, K
Tssr92815 10 28074916 to 28074927 11 + TSS region transcription start site region 92815
Tssr92816 10 28074928 to 28074937 9 + TSS region transcription start site region 92816
Cpgi1407 10 28075831 to 28076539 708 CpG island CpG island 1407
Tssr92817 10 28089230 to 28089240 10 + TSS region transcription start site region 92817
Tssr92818 10 28185333 to 28185337 4 + TSS region transcription start site region 92818
Gm22370 10 28214039 to 28214121 82 - miRNA gene predicted gene, 22370
Tssr92819 10 28247786 to 28247791 5 + TSS region transcription start site region 92819
Tssr92820 10 28277275 to 28277278 3 + TSS region transcription start site region 92820
Tssr92821 10 28498768 to 28498786 18 + TSS region transcription start site region 92821
Tssr92822 10 28586730 to 28586771 41 + TSS region transcription start site region 92822