Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:25289583-25689595

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Akap7 10 25169090 to 25299210 130120 - protein coding gene A kinase (PRKA) anchor protein 7
Tssr92758 10 25295457 to 25295462 5 + TSS region transcription start site region 92758
Cpgi1398 10 25296643 to 25297370 727 CpG island CpG island 1398
Tssr97125 10 25297055 to 25297101 46 - TSS region transcription start site region 97125
Tssr97126 10 25298277 to 25298313 36 - TSS region transcription start site region 97126
Gm40617 10 25299122 to 25306436 7314 + antisense lncRNA gene predicted gene, 40617
Tssr97127 10 25299207 to 25299224 17 - TSS region transcription start site region 97127
Cpgi1399 10 25314389 to 25314565 176 CpG island CpG island 1399
Cpgi1400 10 25359421 to 25360632 1211 CpG island CpG island 1400
Epb41l2 10 25359798 to 25523519 163721 + protein coding gene erythrocyte membrane protein band 4.1 like 2
Tssr92759 10 25359820 to 25359844 24 + TSS region transcription start site region 92759
Tssr92760 10 25359850 to 25359887 37 + TSS region transcription start site region 92760
Tssr92761 10 25375199 to 25375234 35 + TSS region transcription start site region 92761
Tssr92762 10 25375238 to 25375249 11 + TSS region transcription start site region 92762
Tssr92763 10 25375250 to 25375265 15 + TSS region transcription start site region 92763
Tssr92764 10 25377578 to 25377594 16 + TSS region transcription start site region 92764
Tssr92765 10 25383832 to 25383851 19 + TSS region transcription start site region 92765
Tssr92766 10 25398593 to 25398604 11 + TSS region transcription start site region 92766
Tssr92767 10 25404566 to 25404570 4 + TSS region transcription start site region 92767
Tssr92768 10 25408346 to 25408395 49 + TSS region transcription start site region 92768
Tssr92769 10 25414588 to 25414590 2 + TSS region transcription start site region 92769
Gm47830 10 25415354 to 25416185 831 - pseudogene predicted gene, 47830
Tssr92770 10 25425880 to 25425920 40 + TSS region transcription start site region 92770
Tssr92771 10 25432476 to 25432517 41 + TSS region transcription start site region 92771
Tssr92772 10 25432576 to 25432619 43 + TSS region transcription start site region 92772
Tssr92773 10 25436919 to 25436930 11 + TSS region transcription start site region 92773
Tssr92774 10 25436965 to 25437002 37 + TSS region transcription start site region 92774
Tssr92775 10 25437007 to 25437032 25 + TSS region transcription start site region 92775
Tssr92776 10 25441391 to 25441408 17 + TSS region transcription start site region 92776
Tssr92777 10 25441411 to 25441450 39 + TSS region transcription start site region 92777
Tssr92778 10 25441795 to 25441810 15 + TSS region transcription start site region 92778
Tssr92779 10 25473077 to 25473082 5 + TSS region transcription start site region 92779
Tssr92780 10 25476248 to 25476253 5 + TSS region transcription start site region 92780
Tssr92781 10 25489583 to 25489595 12 + TSS region transcription start site region 92781
Tssr92782 10 25489634 to 25489653 19 + TSS region transcription start site region 92782
Tssr92783 10 25489696 to 25489724 28 + TSS region transcription start site region 92783
Tssr92784 10 25498590 to 25498602 12 + TSS region transcription start site region 92784
Smlr1 10 25527943 to 25536267 8324 - protein coding gene small leucine-rich protein 1
Tssr97128 10 25536091 to 25536111 20 - TSS region transcription start site region 97128
Tssr97129 10 25536114 to 25536155 41 - TSS region transcription start site region 97129
Tssr92785 10 25536365 to 25536396 31 + TSS region transcription start site region 92785
Gm29571 10 25536386 to 25673343 136957 + antisense lncRNA gene predicted gene 29571
Gm36908 10 25615632 to 25621563 5931 - lincRNA gene predicted gene, 36908
Tssr97130 10 25621555 to 25621568 13 - TSS region transcription start site region 97130
Gm47924 10 25627573 to 25628874 1301 - pseudogene predicted gene, 47924
D10Mit214 10 25649105 to 25649228 123 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 214
Lith21 10 25649105 to 25649228 123 QTL lithogenic gene 21