Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:24841000-25601028

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120 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bmiq9 10 13000000 to 25000000 12000000 QTL body mass index QTL 9
Tssr92740 10 24842291 to 24842308 17 + TSS region transcription start site region 92740
Tssr92741 10 24842329 to 24842336 7 + TSS region transcription start site region 92741
Tssr97084 10 24842796 to 24842829 33 - TSS region transcription start site region 97084
Cpgi1394 10 24869705 to 24870355 650 CpG island CpG island 1394
Tssr92742 10 24869982 to 24869989 7 + TSS region transcription start site region 92742
Med23 10 24869986 to 24913529 43543 + protein coding gene mediator complex subunit 23
Tssr92743 10 24869998 to 24870050 52 + TSS region transcription start site region 92743
Gm23410 10 24893980 to 24894086 106 + snRNA gene predicted gene, 23410
Tssr92744 10 24902117 to 24902167 50 + TSS region transcription start site region 92744
Tssr92745 10 24904196 to 24904201 5 + TSS region transcription start site region 92745
Mir6905 10 24910664 to 24910733 69 + miRNA gene microRNA 6905
Arg1 10 24915207 to 24927470 12263 - protein coding gene arginase, liver
Tssr97085 10 24915492 to 24915493 1 - TSS region transcription start site region 97085
Tssr97086 10 24915538 to 24915555 17 - TSS region transcription start site region 97086
Tssr97087 10 24915572 to 24915581 9 - TSS region transcription start site region 97087
Tssr92746 10 24915620 to 24915637 17 + TSS region transcription start site region 92746
Tssr97088 10 24915630 to 24915641 11 - TSS region transcription start site region 97088
Tssr97089 10 24915649 to 24915656 7 - TSS region transcription start site region 97089
Tssr97090 10 24915680 to 24915687 7 - TSS region transcription start site region 97090
Tssr92747 10 24915693 to 24915727 34 + TSS region transcription start site region 92747
Tssr97091 10 24916071 to 24916082 11 - TSS region transcription start site region 97091
Tssr97092 10 24916091 to 24916101 10 - TSS region transcription start site region 97092
Tssr97093 10 24916115 to 24916128 13 - TSS region transcription start site region 97093
Tssr97094 10 24916131 to 24916139 8 - TSS region transcription start site region 97094
Tssr97095 10 24916145 to 24916156 11 - TSS region transcription start site region 97095
Tssr97096 10 24916410 to 24916441 31 - TSS region transcription start site region 97096
Tssr97097 10 24916684 to 24916688 4 - TSS region transcription start site region 97097
Tssr97098 10 24916832 to 24916847 15 - TSS region transcription start site region 97098
Tssr97099 10 24917947 to 24917956 9 - TSS region transcription start site region 97099
Tssr97100 10 24917985 to 24918017 32 - TSS region transcription start site region 97100
Tssr92748 10 24920051 to 24920057 6 + TSS region transcription start site region 92748
Tssr97101 10 24920693 to 24920711 18 - TSS region transcription start site region 97101
Tssr97102 10 24920757 to 24920776 19 - TSS region transcription start site region 97102
Tssr92749 10 24920766 to 24920781 15 + TSS region transcription start site region 92749
Tssr97103 10 24921799 to 24921810 11 - TSS region transcription start site region 97103
Tssr97104 10 24921840 to 24921857 17 - TSS region transcription start site region 97104
Tssr97105 10 24921894 to 24921902 8 - TSS region transcription start site region 97105
Tssr97106 10 24922137 to 24922148 11 - TSS region transcription start site region 97106
Gm40616 10 24922700 to 24927302 4602 + lncRNA gene predicted gene, 40616
Tssr97107 10 24924258 to 24924285 27 - TSS region transcription start site region 97107
Tssr97108 10 24926735 to 24926744 9 - TSS region transcription start site region 97108
Tssr97109 10 24927444 to 24927460 16 - TSS region transcription start site region 97109
Tssr92750 10 24927591 to 24927611 20 + TSS region transcription start site region 92750
Gm36172 10 24927613 to 24929971 2358 + bidirectional promoter lncRNA gene predicted gene, 36172
Tssr97110 10 24927719 to 24927728 9 - TSS region transcription start site region 97110
Gm36228 10 24930569 to 24962092 31523 - lncRNA gene predicted gene, 36228
Tssr97111 10 24953997 to 24954008 11 - TSS region transcription start site region 97111
Tssr92751 10 24954227 to 24954239 12 + TSS region transcription start site region 92751
Tssr97112 10 24959477 to 24959480 3 - TSS region transcription start site region 97112
Tssr97113 10 24959583 to 24959590 7 - TSS region transcription start site region 97113
Tssr97114 10 24959901 to 24959913 12 - TSS region transcription start site region 97114
Tssr97115 10 24959944 to 24959968 24 - TSS region transcription start site region 97115
Tssr92752 10 25000006 to 25000029 23 + TSS region transcription start site region 92752
Gm47715 10 25000020 to 25031035 31015 + lincRNA gene predicted gene, 47715
Tssr92753 10 25053286 to 25053287 1 + TSS region transcription start site region 92753
Gm4777 10 25053288 to 25054301 1013 + pseudogene predicted gene 4777
Gm22566 10 25054140 to 25054224 84 + miRNA gene predicted gene, 22566
Cpgi1395 10 25086622 to 25086961 339 CpG island CpG island 1395
Tssr97116 10 25098091 to 25098114 23 - TSS region transcription start site region 97116
Tssr92754 10 25109935 to 25109951 16 + TSS region transcription start site region 92754
Tssr92755 10 25109976 to 25109987 11 + TSS region transcription start site region 92755
Tssr92756 10 25128582 to 25128597 15 + TSS region transcription start site region 92756
Gm36313 10 25134096 to 25154140 20044 - lncRNA gene predicted gene, 36313
Akap7 10 25169090 to 25299210 130120 - protein coding gene A kinase (PRKA) anchor protein 7
Cpgi1396 10 25199962 to 25200294 332 CpG island CpG island 1396
Tssr97117 10 25200110 to 25200178 68 - TSS region transcription start site region 97117
Tssr97118 10 25200207 to 25200218 11 - TSS region transcription start site region 97118
Tssr97119 10 25200222 to 25200245 23 - TSS region transcription start site region 97119
Tssr97120 10 25215745 to 25215754 9 - TSS region transcription start site region 97120
Tssr97121 10 25220847 to 25220858 11 - TSS region transcription start site region 97121
Tssr97122 10 25220859 to 25220908 49 - TSS region transcription start site region 97122
Tssr92757 10 25221000 to 25221028 28 + TSS region transcription start site region 92757
Tssr97123 10 25246883 to 25246886 3 - TSS region transcription start site region 97123
Gm7791 10 25251500 to 25252038 538 + pseudogene predicted gene 7791
Gm25016 10 25266045 to 25266175 130 - snoRNA gene predicted gene, 25016
Tssr97124 10 25271652 to 25271656 4 - TSS region transcription start site region 97124
Cpgi1397 10 25274989 to 25275183 194 CpG island CpG island 1397
Gm26167 10 25281600 to 25281852 252 - unclassified non-coding RNA gene predicted gene, 26167
Tssr92758 10 25295457 to 25295462 5 + TSS region transcription start site region 92758
Cpgi1398 10 25296643 to 25297370 727 CpG island CpG island 1398
Tssr97125 10 25297055 to 25297101 46 - TSS region transcription start site region 97125
Tssr97126 10 25298277 to 25298313 36 - TSS region transcription start site region 97126
Gm40617 10 25299122 to 25306436 7314 + antisense lncRNA gene predicted gene, 40617
Tssr97127 10 25299207 to 25299224 17 - TSS region transcription start site region 97127
Cpgi1399 10 25314389 to 25314565 176 CpG island CpG island 1399
Cpgi1400 10 25359421 to 25360632 1211 CpG island CpG island 1400
Epb41l2 10 25359798 to 25523519 163721 + protein coding gene erythrocyte membrane protein band 4.1 like 2
Tssr92759 10 25359820 to 25359844 24 + TSS region transcription start site region 92759
Tssr92760 10 25359850 to 25359887 37 + TSS region transcription start site region 92760
Tssr92761 10 25375199 to 25375234 35 + TSS region transcription start site region 92761
Tssr92762 10 25375238 to 25375249 11 + TSS region transcription start site region 92762
Tssr92763 10 25375250 to 25375265 15 + TSS region transcription start site region 92763
Tssr92764 10 25377578 to 25377594 16 + TSS region transcription start site region 92764
Tssr92765 10 25383832 to 25383851 19 + TSS region transcription start site region 92765
Tssr92766 10 25398593 to 25398604 11 + TSS region transcription start site region 92766
Tssr92767 10 25404566 to 25404570 4 + TSS region transcription start site region 92767
Tssr92768 10 25408346 to 25408395 49 + TSS region transcription start site region 92768
Tssr92769 10 25414588 to 25414590 2 + TSS region transcription start site region 92769
Gm47830 10 25415354 to 25416185 831 - pseudogene predicted gene, 47830
Tssr92770 10 25425880 to 25425920 40 + TSS region transcription start site region 92770
Tssr92771 10 25432476 to 25432517 41 + TSS region transcription start site region 92771
Tssr92772 10 25432576 to 25432619 43 + TSS region transcription start site region 92772
Tssr92773 10 25436919 to 25436930 11 + TSS region transcription start site region 92773
Tssr92774 10 25436965 to 25437002 37 + TSS region transcription start site region 92774
Tssr92775 10 25437007 to 25437032 25 + TSS region transcription start site region 92775
Tssr92776 10 25441391 to 25441408 17 + TSS region transcription start site region 92776
Tssr92777 10 25441411 to 25441450 39 + TSS region transcription start site region 92777
Tssr92778 10 25441795 to 25441810 15 + TSS region transcription start site region 92778
Tssr92779 10 25473077 to 25473082 5 + TSS region transcription start site region 92779
Tssr92780 10 25476248 to 25476253 5 + TSS region transcription start site region 92780
Tssr92781 10 25489583 to 25489595 12 + TSS region transcription start site region 92781
Tssr92782 10 25489634 to 25489653 19 + TSS region transcription start site region 92782
Tssr92783 10 25489696 to 25489724 28 + TSS region transcription start site region 92783
Tssr92784 10 25498590 to 25498602 12 + TSS region transcription start site region 92784
Smlr1 10 25527943 to 25536267 8324 - protein coding gene small leucine-rich protein 1
Tssr97128 10 25536091 to 25536111 20 - TSS region transcription start site region 97128
Tssr97129 10 25536114 to 25536155 41 - TSS region transcription start site region 97129
Tssr92785 10 25536365 to 25536396 31 + TSS region transcription start site region 92785
Gm29571 10 25536386 to 25673343 136957 + antisense lncRNA gene predicted gene 29571