Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:2440091-3818193

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm30674 10 3104119 to 3104849 730 + protein coding gene predicted gene, 30674
Gm3318 10 3117805 to 3118987 1182 - pseudogene predicted gene 3318
9230019H11Rik 10 3119841 to 3129546 9705 + lincRNA gene RIKEN cDNA 9230019H11 gene
B020014A21Rik 10 3125091 to 3133193 8102 - lincRNA gene RIKEN cDNA B020014A21 gene
Gm8155 10 3139466 to 3141067 1601 - pseudogene predicted gene 8155
Gm48097 10 3176020 to 3176188 168 + pseudogene predicted gene, 48097
Gm6667 10 3212803 to 3235033 22230 - pseudogene predicted gene 6667
H60c 10 3256208 to 3267771 11563 - protein coding gene histocompatibility 60c
Tssr96502 10 3267718 to 3267742 24 - TSS region transcription start site region 96502
Tssr96503 10 3267768 to 3267773 5 - TSS region transcription start site region 96503
Gm29826 10 3268040 to 3355877 87837 + lncRNA gene predicted gene, 29826
Gm16514 10 3268330 to 3268771 441 - pseudogene predicted gene, Gm16514
Gm18703 10 3303049 to 3303381 332 + pseudogene predicted gene, 18703
Gm40590 10 3345480 to 3346710 1230 - lncRNA gene predicted gene, 40590
Gm26752 10 3364073 to 3367135 3062 - lincRNA gene predicted gene, 26752
Ppp1r14c 10 3366071 to 3464975 98904 + protein coding gene protein phosphatase 1, regulatory inhibitor subunit 14C
Cpgi1271 10 3366088 to 3367416 1328 CpG island CpG island 1271
Tssr92203 10 3366125 to 3366160 35 + TSS region transcription start site region 92203
Tssr92204 10 3366170 to 3366207 37 + TSS region transcription start site region 92204
Tssr92205 10 3366209 to 3366220 11 + TSS region transcription start site region 92205
Tssr3109 10 3366271 to 3366283 12 + TSS region transcription start site region 3109
Tssr92206 10 3366351 to 3366380 29 + TSS region transcription start site region 92206
Tssr92207 10 3366506 to 3366590 84 + TSS region transcription start site region 92207
Tssr92208 10 3391264 to 3391266 2 + TSS region transcription start site region 92208
Tssr92209 10 3395782 to 3395814 32 + TSS region transcription start site region 92209
Gm24482 10 3425023 to 3425115 92 + miRNA gene predicted gene, 24482
Tssr92210 10 3452534 to 3452550 16 + TSS region transcription start site region 92210
Gm29987 10 3482654 to 3497390 14736 + lncRNA gene predicted gene, 29987
Gm30033 10 3509826 to 3539627 29801 + lncRNA gene predicted gene, 30033
Tssr92211 10 3540232 to 3540246 14 + TSS region transcription start site region 92211
Tssr92212 10 3540265 to 3540282 17 + TSS region transcription start site region 92212
Iyd 10 3540279 to 3554877 14598 + protein coding gene iodotyrosine deiodinase
A330032P22Rik 10 3717773 to 3731905 14132 + lncRNA gene RIKEN cDNA A330032P22 gene
Tssr92213 10 3718152 to 3718168 16 + TSS region transcription start site region 92213
Gm30164 10 3730209 to 3760159 29950 - lncRNA gene predicted gene, 30164
Cpgi1270 10 3740216 to 3741066 850 CpG island CpG island 1270
Tssr92214 10 3740253 to 3740271 18 + TSS region transcription start site region 92214
Tssr92215 10 3740348 to 3740430 82 + TSS region transcription start site region 92215
Plekhg1 10 3740364 to 3967303 226939 + protein coding gene pleckstrin homology domain containing, family G (with RhoGef domain) member 1
Tssr92216 10 3740453 to 3740486 33 + TSS region transcription start site region 92216
Tssr92217 10 3740644 to 3740671 27 + TSS region transcription start site region 92217
Tssr96504 10 3755187 to 3755234 47 - TSS region transcription start site region 96504
Tssr3110 10 3758392 to 3758400 8 + TSS region transcription start site region 3110
Tssr92218 10 3788895 to 3788899 4 + TSS region transcription start site region 92218
Tssr92219 10 3789377 to 3789378 1 + TSS region transcription start site region 92219