Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:24077490-24822657

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(10Taar2-Taar9)1Tboz 10 23938572 to 24109534 170962 chromosomal deletion deletion, Chr 10, Thomas Bozza 1
Del(10Taar2-Taar9)2Tboz 10 23938572 to 24109534 170962 chromosomal deletion deletion, Chr 10, Thomas Bozza 2
Taar8a 10 24076500 to 24077534 1034 + protein coding gene trace amine-associated receptor 8A
Taar8b 10 24091260 to 24092294 1034 - protein coding gene trace amine-associated receptor 8B
Taar8c 10 24100878 to 24101912 1034 - protein coding gene trace amine-associated receptor 8C
Taar9 10 24108488 to 24109534 1046 - protein coding gene trace amine-associated receptor 9
Gm40614 10 24125825 to 24132485 6660 - lincRNA gene predicted gene, 40614
Tssr97063 10 24132478 to 24132497 19 - TSS region transcription start site region 97063
D10Mit249 10 24134003 to 24134150 147 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 249
D10Mit249.1 10 24134134 to 24134246 112 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 249.1
Cpgi1389 10 24149175 to 24149780 605 CpG island CpG island 1389
Stx7 10 24149288 to 24188961 39673 + protein coding gene syntaxin 7
Tssr92720 10 24149291 to 24149376 85 + TSS region transcription start site region 92720
Tssr92721 10 24149444 to 24149467 23 + TSS region transcription start site region 92721
Tssr92722 10 24149527 to 24149577 50 + TSS region transcription start site region 92722
Tssr92723 10 24150936 to 24150971 35 + TSS region transcription start site region 92723
Tssr92724 10 24151141 to 24151171 30 + TSS region transcription start site region 92724
Tssr92725 10 24188785 to 24188802 17 + TSS region transcription start site region 92725
Tssr92726 10 24189029 to 24189043 14 + TSS region transcription start site region 92726
Tssr92727 10 24189083 to 24189100 17 + TSS region transcription start site region 92727
Cpgi1390 10 24223405 to 24224098 693 CpG island CpG island 1390
Tssr92728 10 24223409 to 24223430 21 + TSS region transcription start site region 92728
Tssr3166 10 24223442 to 24223445 3 + TSS region transcription start site region 3166
Moxd1 10 24223517 to 24302783 79266 + protein coding gene monooxygenase, DBH-like 1
Tssr92729 10 24223539 to 24223601 62 + TSS region transcription start site region 92729
Tssr92730 10 24223604 to 24223611 7 + TSS region transcription start site region 92730
Tssr97064 10 24294650 to 24294675 25 - TSS region transcription start site region 97064
D10Mit106 10 24389703 to 24389827 124 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 106
Tssr97065 10 24445078 to 24445089 11 - TSS region transcription start site region 97065
Tssr92731 10 24447468 to 24447472 4 + TSS region transcription start site region 92731
Gm15271 10 24447490 to 24452657 5167 + lincRNA gene predicted gene 15271
Gm40615 10 24458374 to 24463531 5157 + lncRNA gene predicted gene, 40615
Gm15272 10 24514279 to 24514511 232 - pseudogene predicted gene 15272
Gm15270 10 24549441 to 24597108 47667 - unclassified non-coding RNA gene predicted gene 15270
Gm36089 10 24551577 to 24570366 18789 + lncRNA gene predicted gene, 36089
Tssr3167 10 24553329 to 24553378 49 + TSS region transcription start site region 3167
Gm6893 10 24567077 to 24568134 1057 - pseudogene predicted gene 6893
Tssr97066 10 24588781 to 24588784 3 - TSS region transcription start site region 97066
Tssr97067 10 24590606 to 24590613 7 - TSS region transcription start site region 97067
Tssr92732 10 24590942 to 24590943 1 + TSS region transcription start site region 92732
Cpgi1391 10 24595362 to 24596540 1178 CpG island CpG island 1391
Tssr92733 10 24595434 to 24595445 11 + TSS region transcription start site region 92733
Ccn2 10 24595442 to 24598683 3241 + protein coding gene cellular communication network factor 2
Tssr92734 10 24595489 to 24595520 31 + TSS region transcription start site region 92734
Tssr92735 10 24595623 to 24595630 7 + TSS region transcription start site region 92735
Tssr97068 10 24595797 to 24595809 12 - TSS region transcription start site region 97068
Tssr92736 10 24596040 to 24596071 31 + TSS region transcription start site region 92736
Tssr92737 10 24596439 to 24596456 17 + TSS region transcription start site region 92737
D10Mit86.1 10 24597987 to 24598140 153 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 86.1
D10Mit86 10 24598163 to 24598316 153 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 86
D10Mit86.2 10 24598309 to 24598449 140 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 86.2
Cpgi1392 10 24625322 to 24625487 165 CpG island CpG island 1392
Enpp1 10 24637914 to 24712159 74245 - protein coding gene ectonucleotide pyrophosphatase/phosphodiesterase 1
Tssr92738 10 24639854 to 24639869 15 + TSS region transcription start site region 92738
Tssr92739 10 24640757 to 24640761 4 + TSS region transcription start site region 92739
Tssr97069 10 24645387 to 24645400 13 - TSS region transcription start site region 97069
Tssr97070 10 24692378 to 24692391 13 - TSS region transcription start site region 97070
Tssr97071 10 24692395 to 24692400 5 - TSS region transcription start site region 97071
Tssr97072 10 24692414 to 24692429 15 - TSS region transcription start site region 97072
Tssr97073 10 24692447 to 24692457 10 - TSS region transcription start site region 97073
Cpgi1393 10 24711505 to 24712512 1007 CpG island CpG island 1393
Tssr97074 10 24711909 to 24711918 9 - TSS region transcription start site region 97074
Tssr97075 10 24711933 to 24711949 16 - TSS region transcription start site region 97075
Tssr97076 10 24711987 to 24712004 17 - TSS region transcription start site region 97076
Tssr97077 10 24712133 to 24712146 13 - TSS region transcription start site region 97077
Enpp3 10 24773814 to 24836195 62381 - protein coding gene ectonucleotide pyrophosphatase/phosphodiesterase 3
Tssr97078 10 24785000 to 24785045 45 - TSS region transcription start site region 97078
Tssr97079 10 24787767 to 24787776 9 - TSS region transcription start site region 97079
Tssr97080 10 24806010 to 24806047 37 - TSS region transcription start site region 97080
Tssr97081 10 24813743 to 24813747 4 - TSS region transcription start site region 97081