Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:23820592-24271206

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc18b1 10 23796986 to 23827968 30982 + protein coding gene solute carrier family 18, subfamily B, member 1
D13Sfk9 10 23822528 to 23822673 145 DNA segment DNA segment, Chr 13, Stephen F. Kingsmore 9
Tssr92711 10 23851427 to 23851453 26 + TSS region transcription start site region 92711
Tssr92712 10 23851454 to 23851489 35 + TSS region transcription start site region 92712
Vnn3 10 23851462 to 23869843 18381 + protein coding gene vanin 3
Tssr92713 10 23851495 to 23851507 12 + TSS region transcription start site region 92713
Tssr92714 10 23851522 to 23851533 11 + TSS region transcription start site region 92714
Tssr92715 10 23851537 to 23851548 11 + TSS region transcription start site region 92715
Tssr92716 10 23851557 to 23851580 23 + TSS region transcription start site region 92716
Tssr92717 10 23851749 to 23851774 25 + TSS region transcription start site region 92717
Vnn1 10 23894688 to 23905343 10655 + protein coding gene vanin 1
Tssr92718 10 23894847 to 23894863 16 + TSS region transcription start site region 92718
Cpgi1387 10 23894951 to 23895231 280 CpG island CpG island 1387
Tssr92719 10 23902146 to 23902156 10 + TSS region transcription start site region 92719
Taar1 10 23920406 to 23921404 998 + protein coding gene trace amine-associated receptor 1
Del(10Taar2-Taar9)2Tboz 10 23938572 to 24109534 170962 chromosomal deletion deletion, Chr 10, Thomas Bozza 2
Del(10Taar2-Taar9)1Tboz 10 23938572 to 24109534 170962 chromosomal deletion deletion, Chr 10, Thomas Bozza 1
Taar2 10 23938572 to 23941583 3011 + protein coding gene trace amine-associated receptor 2
Cpgi1388 10 23940772 to 23941019 247 CpG island CpG island 1388
Taar3 10 23949558 to 23950589 1031 + protein coding gene trace amine-associated receptor 3
Taar4 10 23960494 to 23961537 1043 + protein coding gene trace amine-associated receptor 4
Taar5 10 23970706 to 23971719 1013 + protein coding gene trace amine-associated receptor 5
Taar6 10 23984609 to 23985646 1037 - protein coding gene trace amine-associated receptor 6
Taar7a 10 23992405 to 23993481 1076 - protein coding gene trace amine-associated receptor 7A
Taar7b 10 23999939 to 24001015 1076 + protein coding gene trace amine-associated receptor 7B
Taar7c-ps 10 24013470 to 24014524 1054 + pseudogene trace amine-associated receptor 7C, pseudogene
Gm15136 10 24021229 to 24021761 532 + pseudogene predicted gene 15136
Taar7d 10 24027222 to 24028298 1076 + protein coding gene trace amine-associated receptor 7D
Taar7e 10 24037614 to 24038690 1076 + protein coding gene trace amine-associated receptor 7E
Gm6884 10 24045592 to 24046206 614 + pseudogene predicted gene 6884
Taar7f 10 24049510 to 24050586 1076 + protein coding gene trace amine-associated receptor 7F
Taar8a 10 24076500 to 24077534 1034 + protein coding gene trace amine-associated receptor 8A
Taar8b 10 24091260 to 24092294 1034 - protein coding gene trace amine-associated receptor 8B
Taar8c 10 24100878 to 24101912 1034 - protein coding gene trace amine-associated receptor 8C
Taar9 10 24108488 to 24109534 1046 - protein coding gene trace amine-associated receptor 9
Gm40614 10 24125825 to 24132485 6660 - lincRNA gene predicted gene, 40614
Tssr97063 10 24132478 to 24132497 19 - TSS region transcription start site region 97063
D10Mit249 10 24134003 to 24134150 147 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 249
D10Mit249.1 10 24134134 to 24134246 112 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 249.1
Cpgi1389 10 24149175 to 24149780 605 CpG island CpG island 1389
Stx7 10 24149288 to 24188961 39673 + protein coding gene syntaxin 7
Tssr92720 10 24149291 to 24149376 85 + TSS region transcription start site region 92720
Tssr92721 10 24149444 to 24149467 23 + TSS region transcription start site region 92721
Tssr92722 10 24149527 to 24149577 50 + TSS region transcription start site region 92722
Tssr92723 10 24150936 to 24150971 35 + TSS region transcription start site region 92723
Tssr92724 10 24151141 to 24151171 30 + TSS region transcription start site region 92724
Tssr92725 10 24188785 to 24188802 17 + TSS region transcription start site region 92725
Tssr92726 10 24189029 to 24189043 14 + TSS region transcription start site region 92726
Tssr92727 10 24189083 to 24189100 17 + TSS region transcription start site region 92727
Cpgi1390 10 24223405 to 24224098 693 CpG island CpG island 1390
Tssr92728 10 24223409 to 24223430 21 + TSS region transcription start site region 92728
Tssr3166 10 24223442 to 24223445 3 + TSS region transcription start site region 3166
Moxd1 10 24223517 to 24302783 79266 + protein coding gene monooxygenase, DBH-like 1
Tssr92729 10 24223539 to 24223601 62 + TSS region transcription start site region 92729
Tssr92730 10 24223604 to 24223611 7 + TSS region transcription start site region 92730