Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:23343020-23839431

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Eya4 10 23102963 to 23350786 247823 - protein coding gene EYA transcriptional coactivator and phosphatase 4
Cpgi1383 10 23348384 to 23348781 397 CpG island CpG island 1383
Cpgi1384 10 23349165 to 23350855 1690 CpG island CpG island 1384
Tssr97054 10 23349860 to 23349881 21 - TSS region transcription start site region 97054
Tssr97055 10 23349892 to 23349919 27 - TSS region transcription start site region 97055
Tssr97056 10 23350191 to 23350251 60 - TSS region transcription start site region 97056
Tssr3165 10 23350329 to 23350342 13 - TSS region transcription start site region 3165
Tssr97057 10 23350808 to 23350832 24 - TSS region transcription start site region 97057
Gm47843 10 23573020 to 23609431 36411 - lincRNA gene predicted gene, 47843
4930520K02Rik 10 23611263 to 23622148 10885 - lincRNA gene RIKEN cDNA 4930520K02 gene
Gm35291 10 23698535 to 23711487 12952 - lncRNA gene predicted gene, 35291
n-TWcca1 10 23777083 to 23777154 71 - tRNA gene nuclear encoded tRNA trytophan 1 (anticodon CCA)
Rps12 10 23785183 to 23787209 2026 - protein coding gene ribosomal protein S12
Snora33 10 23785347 to 23785451 104 - snoRNA gene small nucleolar RNA, H/ACA box 33
Snord100 10 23785754 to 23785821 67 - snoRNA gene small nucleolar RNA, C/D box 100
Tssr97058 10 23785816 to 23785821 5 - TSS region transcription start site region 97058
Gm23130 10 23786470 to 23786543 73 - snoRNA gene predicted gene, 23130
Cpgi1385 10 23786615 to 23787870 1255 CpG island CpG island 1385
Tssr97059 10 23787050 to 23787074 24 - TSS region transcription start site region 97059
Tssr97060 10 23787143 to 23787160 17 - TSS region transcription start site region 97060
Tssr97061 10 23787195 to 23787206 11 - TSS region transcription start site region 97061
Tssr97062 10 23787215 to 23787252 37 - TSS region transcription start site region 97062
Tssr92707 10 23787416 to 23787437 21 + TSS region transcription start site region 92707
D13Sfk8 10 23788193 to 23788335 142 DNA segment DNA segment, Chr 13, Stephen F. Kingsmore 8
D13Sfk10 10 23792164 to 23792316 152 DNA segment DNA segment, Chr 13, Stephen F. Kingsmore 10
Tssr92708 10 23796645 to 23796660 15 + TSS region transcription start site region 92708
Cpgi1386 10 23796787 to 23797461 674 CpG island CpG island 1386
Tssr92709 10 23796946 to 23797051 105 + TSS region transcription start site region 92709
Slc18b1 10 23796986 to 23827968 30982 + protein coding gene solute carrier family 18, subfamily B, member 1
Tssr92710 10 23797052 to 23797070 18 + TSS region transcription start site region 92710
D13Sfk9 10 23822528 to 23822673 145 DNA segment DNA segment, Chr 13, Stephen F. Kingsmore 9