Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:21996309-22138079

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sgk1 10 21882184 to 21999903 117719 + protein coding gene serum/glucocorticoid regulated kinase 1
Tssr92667 10 21996923 to 21996936 13 + TSS region transcription start site region 92667
Tssr92668 10 21996945 to 21996956 11 + TSS region transcription start site region 92668
Tssr92669 10 21997013 to 21997026 13 + TSS region transcription start site region 92669
Tssr92670 10 21997068 to 21997079 11 + TSS region transcription start site region 92670
Tssr92671 10 21997097 to 21997112 15 + TSS region transcription start site region 92671
Tssr92672 10 21997121 to 21997135 14 + TSS region transcription start site region 92672
Tssr92673 10 21997136 to 21997158 22 + TSS region transcription start site region 92673
Tssr92674 10 21997169 to 21997181 12 + TSS region transcription start site region 92674
Tssr92675 10 21997435 to 21997449 14 + TSS region transcription start site region 92675
Tssr97013 10 22010109 to 22010112 3 - TSS region transcription start site region 97013
Gm8540 10 22040701 to 22048512 7811 - pseudogene predicted gene 8540
Gm7672 10 22046114 to 22046985 871 - pseudogene predicted gene 7672
Tssr97014 10 22048513 to 22048514 1 - TSS region transcription start site region 97014
Tssr97015 10 22048530 to 22048537 7 - TSS region transcription start site region 97015
Gm18637 10 22052153 to 22053691 1538 + pseudogene predicted gene, 18637
Gm34267 10 22054388 to 22058655 4267 - lncRNA gene predicted gene, 34267
Cpgi1366 10 22058338 to 22058951 613 CpG island CpG island 1366
Tssr97016 10 22058589 to 22058604 15 - TSS region transcription start site region 97016
Tssr97017 10 22058607 to 22058639 32 - TSS region transcription start site region 97017
Tssr97018 10 22058648 to 22058659 11 - TSS region transcription start site region 97018
Tssr92676 10 22058866 to 22058881 15 + TSS region transcription start site region 92676
4930444G20Rik 10 22066309 to 22068079 1770 - protein coding gene RIKEN cDNA 4930444G20 gene
Tssr97019 10 22067662 to 22067665 3 - TSS region transcription start site region 97019
Tssr97020 10 22068538 to 22068546 8 - TSS region transcription start site region 97020
Gm2539 10 22077921 to 22103522 25601 + pseudogene predicted gene, 2539
Gm19791 10 22110815 to 22113358 2543 + pseudogene predicted gene, 19791
E030030I06Rik 10 22113050 to 22149270 36220 - protein coding gene RIKEN cDNA E030030I06 gene
Gm7678 10 22124496 to 22125435 939 + pseudogene predicted gene 7678