Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:21647244-22007255

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48 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr92647 10 21669216 to 21669226 10 + TSS region transcription start site region 92647
Tssr92648 10 21690362 to 21690373 11 + TSS region transcription start site region 92648
Gm5420 10 21690845 to 21693978 3133 + lincRNA gene predicted gene 5420
D10Mit16 10 21715293 to 21715442 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 16
Lmblgq4 10 21715293 to 68255809 46540516 QTL limb length QTL 4
Gm29323 10 21743867 to 21747006 3139 + lincRNA gene predicted gene 29323
Tssr97007 10 21753919 to 21753930 11 - TSS region transcription start site region 97007
Tssr97008 10 21785853 to 21785860 7 - TSS region transcription start site region 97008
Tssr92649 10 21827244 to 21827255 11 + TSS region transcription start site region 92649
Platr6 10 21830499 to 21844851 14352 - lincRNA gene pluripotency associated transcript 6
Tssr97009 10 21844623 to 21844640 17 - TSS region transcription start site region 97009
Tssr97010 10 21844854 to 21844868 14 - TSS region transcription start site region 97010
Tssr97011 10 21846500 to 21846507 7 - TSS region transcription start site region 97011
Gm46215 10 21874671 to 21882278 7607 - lncRNA gene predicted gene, 46215
Gm23839 10 21878784 to 21878892 108 - snoRNA gene predicted gene, 23839
Sgk1 10 21882184 to 21999903 117719 + protein coding gene serum/glucocorticoid regulated kinase 1
Cpgi1363 10 21882205 to 21882593 388 CpG island CpG island 1363
Tssr92650 10 21882214 to 21882239 25 + TSS region transcription start site region 92650
Tssr92651 10 21882300 to 21882354 54 + TSS region transcription start site region 92651
Tssr92652 10 21884172 to 21884175 3 + TSS region transcription start site region 92652
Tssr92653 10 21886622 to 21886645 23 + TSS region transcription start site region 92653
Tssr3160 10 21907954 to 21907971 17 - TSS region transcription start site region 3160
Gm18511 10 21948860 to 21949659 799 + pseudogene predicted gene, 18511
Tssr92654 10 21978643 to 21978689 46 + TSS region transcription start site region 92654
Tssr92655 10 21992206 to 21992213 7 + TSS region transcription start site region 92655
Tssr92656 10 21992216 to 21992234 18 + TSS region transcription start site region 92656
Cpgi1364 10 21992860 to 21993326 466 CpG island CpG island 1364
Tssr92657 10 21993536 to 21993554 18 + TSS region transcription start site region 92657
Cpgi1365 10 21993624 to 21994931 1307 CpG island CpG island 1365
Tssr92658 10 21993877 to 21993886 9 + TSS region transcription start site region 92658
Tssr92659 10 21993946 to 21993955 9 + TSS region transcription start site region 92659
Tssr92660 10 21993965 to 21993990 25 + TSS region transcription start site region 92660
Tssr92661 10 21994001 to 21994021 20 + TSS region transcription start site region 92661
Tssr92662 10 21994026 to 21994045 19 + TSS region transcription start site region 92662
Tssr92663 10 21994145 to 21994184 39 + TSS region transcription start site region 92663
Tssr97012 10 21994514 to 21994552 38 - TSS region transcription start site region 97012
Tssr92664 10 21994674 to 21994694 20 + TSS region transcription start site region 92664
Tssr92665 10 21995346 to 21995350 4 + TSS region transcription start site region 92665
Tssr92666 10 21995780 to 21995809 29 + TSS region transcription start site region 92666
Tssr92667 10 21996923 to 21996936 13 + TSS region transcription start site region 92667
Tssr92668 10 21996945 to 21996956 11 + TSS region transcription start site region 92668
Tssr92669 10 21997013 to 21997026 13 + TSS region transcription start site region 92669
Tssr92670 10 21997068 to 21997079 11 + TSS region transcription start site region 92670
Tssr92671 10 21997097 to 21997112 15 + TSS region transcription start site region 92671
Tssr92672 10 21997121 to 21997135 14 + TSS region transcription start site region 92672
Tssr92673 10 21997136 to 21997158 22 + TSS region transcription start site region 92673
Tssr92674 10 21997169 to 21997181 12 + TSS region transcription start site region 92674
Tssr92675 10 21997435 to 21997449 14 + TSS region transcription start site region 92675