Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:21553919-21953930

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm33945 10 21559471 to 21573643 14172 - lncRNA gene predicted gene, 33945
Tssr92638 10 21571727 to 21571737 10 + TSS region transcription start site region 92638
Tssr92639 10 21571747 to 21571754 7 + TSS region transcription start site region 92639
Gm33892 10 21571833 to 21575201 3368 + lncRNA gene predicted gene, 33892
Tssr92640 10 21592135 to 21592151 16 + TSS region transcription start site region 92640
Cpgi1362 10 21593049 to 21593487 438 CpG island CpG island 1362
Tssr92641 10 21593112 to 21593122 10 + TSS region transcription start site region 92641
Tssr92642 10 21593126 to 21593137 11 + TSS region transcription start site region 92642
Tssr92643 10 21593143 to 21593146 3 + TSS region transcription start site region 92643
1700020N01Rik 10 21593145 to 21622375 29230 + protein coding gene RIKEN cDNA 1700020N01 gene
Tssr92644 10 21593151 to 21593181 30 + TSS region transcription start site region 92644
Tssr92645 10 21593186 to 21593187 1 + TSS region transcription start site region 92645
Tssr92646 10 21593191 to 21593197 6 + TSS region transcription start site region 92646
Tssr92647 10 21669216 to 21669226 10 + TSS region transcription start site region 92647
Tssr92648 10 21690362 to 21690373 11 + TSS region transcription start site region 92648
Gm5420 10 21690845 to 21693978 3133 + lincRNA gene predicted gene 5420
Lmblgq4 10 21715293 to 68255809 46540516 QTL limb length QTL 4
D10Mit16 10 21715293 to 21715442 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 16
Gm29323 10 21743867 to 21747006 3139 + lincRNA gene predicted gene 29323
Tssr97007 10 21753919 to 21753930 11 - TSS region transcription start site region 97007
Tssr97008 10 21785853 to 21785860 7 - TSS region transcription start site region 97008
Tssr92649 10 21827244 to 21827255 11 + TSS region transcription start site region 92649
Platr6 10 21830499 to 21844851 14352 - lincRNA gene pluripotency associated transcript 6
Tssr97009 10 21844623 to 21844640 17 - TSS region transcription start site region 97009
Tssr97010 10 21844854 to 21844868 14 - TSS region transcription start site region 97010
Tssr97011 10 21846500 to 21846507 7 - TSS region transcription start site region 97011
Gm46215 10 21874671 to 21882278 7607 - lncRNA gene predicted gene, 46215
Gm23839 10 21878784 to 21878892 108 - snoRNA gene predicted gene, 23839
Sgk1 10 21882184 to 21999903 117719 + protein coding gene serum/glucocorticoid regulated kinase 1
Cpgi1363 10 21882205 to 21882593 388 CpG island CpG island 1363
Tssr92650 10 21882214 to 21882239 25 + TSS region transcription start site region 92650
Tssr92651 10 21882300 to 21882354 54 + TSS region transcription start site region 92651
Tssr92652 10 21884172 to 21884175 3 + TSS region transcription start site region 92652
Tssr92653 10 21886622 to 21886645 23 + TSS region transcription start site region 92653
Tssr3160 10 21907954 to 21907971 17 - TSS region transcription start site region 3160
Gm18511 10 21948860 to 21949659 799 + pseudogene predicted gene, 18511