Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:21408112-21778122

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fkbp1a-ps2 10 21410263 to 21410573 310 - pseudogene FK506 binding protein 1a, pseudogene 2
Tssr97006 10 21410579 to 21410587 8 - TSS region transcription start site region 97006
Cpgi1360 10 21419268 to 21419542 274 CpG island CpG island 1360
1700021A07Rik 10 21419358 to 21426565 7207 + lincRNA gene RIKEN cDNA 1700021A07 gene
Tssr92636 10 21419443 to 21419460 17 + TSS region transcription start site region 92636
Tssr92637 10 21419468 to 21419481 13 + TSS region transcription start site region 92637
Gm48385 10 21435833 to 21436235 402 - pseudogene predicted gene, 48385
Gm48386 10 21445181 to 21445636 455 - pseudogene predicted gene, 48386
Cpgi1361 10 21470840 to 21471060 220 CpG island CpG island 1361
D10Mit17 10 21532255 to 21532379 124 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 17
D10Mit2 10 21532255 to 21532377 122 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 2
Eae15 10 21532255 to 21532377 122 QTL experimental allergic encephalomyelitis susceptibility 15
D10Dcr5 10 21532267 to 21532383 116 DNA segment DNA Segment, Chr 10, Derry C. Roopenian 5
Gm33945 10 21559471 to 21573643 14172 - lncRNA gene predicted gene, 33945
Tssr92638 10 21571727 to 21571737 10 + TSS region transcription start site region 92638
Tssr92639 10 21571747 to 21571754 7 + TSS region transcription start site region 92639
Gm33892 10 21571833 to 21575201 3368 + lncRNA gene predicted gene, 33892
Tssr92640 10 21592135 to 21592151 16 + TSS region transcription start site region 92640
Cpgi1362 10 21593049 to 21593487 438 CpG island CpG island 1362
Tssr92641 10 21593112 to 21593122 10 + TSS region transcription start site region 92641
Tssr92642 10 21593126 to 21593137 11 + TSS region transcription start site region 92642
Tssr92643 10 21593143 to 21593146 3 + TSS region transcription start site region 92643
1700020N01Rik 10 21593145 to 21622375 29230 + protein coding gene RIKEN cDNA 1700020N01 gene
Tssr92644 10 21593151 to 21593181 30 + TSS region transcription start site region 92644
Tssr92645 10 21593186 to 21593187 1 + TSS region transcription start site region 92645
Tssr92646 10 21593191 to 21593197 6 + TSS region transcription start site region 92646
Tssr92647 10 21669216 to 21669226 10 + TSS region transcription start site region 92647
Tssr92648 10 21690362 to 21690373 11 + TSS region transcription start site region 92648
Gm5420 10 21690845 to 21693978 3133 + lincRNA gene predicted gene 5420
D10Mit16 10 21715293 to 21715442 149 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 16
Lmblgq4 10 21715293 to 68255809 46540516 QTL limb length QTL 4
Gm29323 10 21743867 to 21747006 3139 + lincRNA gene predicted gene 29323
Tssr97007 10 21753919 to 21753930 11 - TSS region transcription start site region 97007
Eae34 10 114381325 to 21532255 -92849070 QTL experimental allergic encephalomyelitis susceptibility 34