Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:20905490-21158793

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr96975 10 20907046 to 20907083 37 - TSS region transcription start site region 96975
Tssr92611 10 20907326 to 20907350 24 + TSS region transcription start site region 92611
Tssr92612 10 20907394 to 20907412 18 + TSS region transcription start site region 92612
Tssr96976 10 20919728 to 20919734 6 - TSS region transcription start site region 96976
Pgia6 10 20934272 to 20934396 124 QTL proteoglycan induced arthritis 6
D10Mit282 10 20934272 to 20934396 124 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 282
D10Dcr3 10 20934278 to 20934388 110 DNA segment DNA Segment, Chr 10, Derry C. Roopenian 3
Cpgi1353 10 20952045 to 20953076 1031 CpG island CpG island 1353
Tssr96977 10 20952160 to 20952190 30 - TSS region transcription start site region 96977
Tssr92613 10 20952493 to 20952504 11 + TSS region transcription start site region 92613
Ahi1 10 20952547 to 21080429 127882 + protein coding gene Abelson helper integration site 1
Tssr3157 10 20952566 to 20952577 11 + TSS region transcription start site region 3157
Tssr92614 10 20952582 to 20952593 11 + TSS region transcription start site region 92614
Tssr92615 10 20952597 to 20952683 86 + TSS region transcription start site region 92615
Cpgi1354 10 20954261 to 20954582 321 CpG island CpG island 1354
Tssr92616 10 20959595 to 20959643 48 + TSS region transcription start site region 92616
Tssr92617 10 20959694 to 20959710 16 + TSS region transcription start site region 92617
Cpgi1355 10 20994097 to 20994253 156 CpG island CpG island 1355
Tssr92618 10 21027077 to 21027091 14 + TSS region transcription start site region 92618
Gm10826 10 21030490 to 21033793 3303 - unclassified gene predicted gene 10826
Gm20149 10 21033954 to 21046310 12356 - antisense lncRNA gene predicted gene, 20149
D10Mit283.3 10 21035678 to 21035788 110 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 283.3
D10Mit283 10 21035769 to 21035893 124 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 283
D10Mit283.1 10 21035883 to 21036039 156 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 283.1
Tssr92619 10 21055010 to 21055021 11 + TSS region transcription start site region 92619
Tssr96978 10 21065775 to 21065808 33 - TSS region transcription start site region 96978
Tssr96979 10 21083560 to 21083573 13 - TSS region transcription start site region 96979
Gm48189 10 21100560 to 21102226 1666 + lincRNA gene predicted gene, 48189
Myb 10 21124935 to 21160984 36049 - protein coding gene myeloblastosis oncogene
Tssr96980 10 21125254 to 21125264 10 - TSS region transcription start site region 96980
Tssr96981 10 21125437 to 21125450 13 - TSS region transcription start site region 96981
Tssr96982 10 21125968 to 21125972 4 - TSS region transcription start site region 96982
Tssr96983 10 21127707 to 21127708 1 - TSS region transcription start site region 96983
Tssr96984 10 21143051 to 21143062 11 - TSS region transcription start site region 96984
Cpgi1356 10 21144964 to 21145206 242 CpG island CpG island 1356
Gm26577 10 21145094 to 21154374 9280 + antisense lncRNA gene predicted gene, 26577
Tssr3158 10 21145157 to 21145166 9 + TSS region transcription start site region 3158
Tssr96985 10 21146335 to 21146347 12 - TSS region transcription start site region 96985
Tssr96986 10 21146403 to 21146412 9 - TSS region transcription start site region 96986
Tssr96987 10 21146424 to 21146443 19 - TSS region transcription start site region 96987
Tssr96988 10 21146486 to 21146494 8 - TSS region transcription start site region 96988
Tssr96989 10 21150384 to 21150407 23 - TSS region transcription start site region 96989
Tssr92620 10 21152838 to 21152844 6 + TSS region transcription start site region 92620
Tssr96990 10 21152947 to 21152969 22 - TSS region transcription start site region 96990
Tssr96991 10 21157294 to 21157297 3 - TSS region transcription start site region 96991