Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:20030803-20310821

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46 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Map3k5 10 19934472 to 20142753 208281 + protein coding gene mitogen-activated protein kinase kinase kinase 5
Tssr92566 10 20104864 to 20104883 19 + TSS region transcription start site region 92566
Tssr92567 10 20141882 to 20141888 6 + TSS region transcription start site region 92567
Cpgi1347 10 20148296 to 20149832 1536 CpG island CpG island 1347
Tssr92568 10 20148457 to 20148478 21 + TSS region transcription start site region 92568
Tssr92569 10 20148677 to 20148688 11 + TSS region transcription start site region 92569
Tssr92570 10 20148693 to 20148705 12 + TSS region transcription start site region 92570
Tssr3154 10 20148888 to 20148901 13 + TSS region transcription start site region 3154
Map7 10 20148920 to 20281590 132670 + protein coding gene microtubule-associated protein 7
Tssr92571 10 20148978 to 20149014 36 + TSS region transcription start site region 92571
Tssr92572 10 20170725 to 20170758 33 + TSS region transcription start site region 92572
Tssr92573 10 20170761 to 20170796 35 + TSS region transcription start site region 92573
1700026H06Rik 10 20170779 to 20172767 1988 lncRNA gene RIKEN cDNA 1700026H06 gene
Tssr92574 10 20170803 to 20170821 18 + TSS region transcription start site region 92574
Tssr92575 10 20170823 to 20170834 11 + TSS region transcription start site region 92575
Tssr96940 10 20170849 to 20170854 5 - TSS region transcription start site region 96940
Cpgi1348 10 20170875 to 20171044 169 CpG island CpG island 1348
Tssr92576 10 20171003 to 20171045 42 + TSS region transcription start site region 92576
Tssr92577 10 20171089 to 20171100 11 + TSS region transcription start site region 92577
Tssr92578 10 20171902 to 20171927 25 + TSS region transcription start site region 92578
Tssr92579 10 20171956 to 20171975 19 + TSS region transcription start site region 92579
Tssr92580 10 20172001 to 20172012 11 + TSS region transcription start site region 92580
Tssr3155 10 20175305 to 20175310 5 - TSS region transcription start site region 3155
Tssr96941 10 20175314 to 20175322 8 - TSS region transcription start site region 96941
Tssr96942 10 20175329 to 20175346 17 - TSS region transcription start site region 96942
Gm46213 10 20179014 to 20188659 9645 + lncRNA gene predicted gene, 46213
Tssr92581 10 20185424 to 20185425 1 + TSS region transcription start site region 92581
4930405J17Rik 10 20199240 to 20201838 2598 - antisense lncRNA gene RIKEN cDNA 4930405J17 gene
Tssr92582 10 20203605 to 20203616 11 + TSS region transcription start site region 92582
Tssr92583 10 20204859 to 20204900 41 + TSS region transcription start site region 92583
Tssr92584 10 20205249 to 20205282 33 + TSS region transcription start site region 92584
Tssr92585 10 20205295 to 20205323 28 + TSS region transcription start site region 92585
Tssr92586 10 20205356 to 20205366 10 + TSS region transcription start site region 92586
Tssr96943 10 20205892 to 20205929 37 - TSS region transcription start site region 96943
Tssr92587 10 20208435 to 20208446 11 + TSS region transcription start site region 92587
Rpl32l 10 20208490 to 20208888 398 + protein coding gene ribosomal protein L32-like
Gm46214 10 20214843 to 20222892 8049 - lncRNA gene predicted gene, 46214
Tssr92588 10 20229762 to 20229764 2 + TSS region transcription start site region 92588
Tssr92589 10 20229779 to 20229802 23 + TSS region transcription start site region 92589
Gm48249 10 20267049 to 20286647 19598 - antisense lncRNA gene predicted gene, 48249
Tssr92590 10 20267219 to 20267229 10 + TSS region transcription start site region 92590
Tssr92591 10 20267244 to 20267266 22 + TSS region transcription start site region 92591
Tssr92592 10 20267268 to 20267310 42 + TSS region transcription start site region 92592
Gm30285 10 20292785 to 20293206 421 + pseudogene predicted gene, 30285
Mir6413 10 20297581 to 20297688 107 - miRNA gene microRNA 6413
4933406P04Rik 10 20310506 to 20312294 1788 - lincRNA gene RIKEN cDNA 4933406P04 gene