Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:19612854-19952960

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr92552 10 19621992 to 19622004 12 + TSS region transcription start site region 92552
Tssr92553 10 19622014 to 19622035 21 + TSS region transcription start site region 92553
Il22ra2 10 19622028 to 19634681 12653 + protein coding gene interleukin 22 receptor, alpha 2
Tssr96930 10 19632171 to 19632174 3 - TSS region transcription start site region 96930
9230106D20Rik 10 19644750 to 19660801 16051 + lincRNA gene RIKEN cDNA 9230106D20 gene
Tssr3149 10 19644990 to 19644994 4 + TSS region transcription start site region 3149
Tssr92554 10 19679991 to 19679993 2 + TSS region transcription start site region 92554
Cpgi1343 10 19712505 to 19712802 297 CpG island CpG island 1343
Il20ra 10 19712570 to 19760053 47483 + protein coding gene interleukin 20 receptor, alpha
Gm33332 10 19716152 to 19718704 2552 - antisense lncRNA gene predicted gene, 33332
Tssr96931 10 19718686 to 19718723 37 - TSS region transcription start site region 96931
Tssr96932 10 19718782 to 19718794 12 - TSS region transcription start site region 96932
D10Csu1 10 19750280 to 19750721 441 DNA segment DNA segment, Chr 10, Central Connecticut State University 1
Gm25256 10 19782854 to 19782960 106 + snRNA gene predicted gene, 25256
Slc35d3 10 19847916 to 19851459 3543 - protein coding gene solute carrier family 35, member D3
Cpgi1344 10 19848955 to 19851976 3021 CpG island CpG island 1344
Tssr96933 10 19850882 to 19850895 13 - TSS region transcription start site region 96933
Tssr96934 10 19851208 to 19851221 13 - TSS region transcription start site region 96934
Tssr3150 10 19851419 to 19851442 23 - TSS region transcription start site region 3150
Tssr96935 10 19851512 to 19851568 56 - TSS region transcription start site region 96935
Tssr96936 10 19851598 to 19851611 13 - TSS region transcription start site region 96936
Pex7 10 19860090 to 19907674 47584 - protein coding gene peroxisomal biogenesis factor 7
Gm48714 10 19873007 to 19874447 1440 - unclassified gene predicted gene, 48714
Cpgi1345 10 19907028 to 19907771 743 CpG island CpG island 1345
Tssr96937 10 19907622 to 19907627 5 - TSS region transcription start site region 96937
Tssr96938 10 19907631 to 19907640 9 - TSS region transcription start site region 96938
Tssr96939 10 19907645 to 19907689 44 - TSS region transcription start site region 96939
D10Mit169 10 19910064 to 19910146 82 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 169
Cpgi1346 10 19933503 to 19935327 1824 CpG island CpG island 1346
Tssr92555 10 19933557 to 19933566 9 + TSS region transcription start site region 92555
Tssr3151 10 19933579 to 19933591 12 + TSS region transcription start site region 3151
Tssr92556 10 19933598 to 19933613 15 + TSS region transcription start site region 92556
Tssr92557 10 19933615 to 19933625 10 + TSS region transcription start site region 92557
Tssr92558 10 19933687 to 19933698 11 + TSS region transcription start site region 92558
Tssr92559 10 19933924 to 19933953 29 + TSS region transcription start site region 92559
Tssr92560 10 19934070 to 19934105 35 + TSS region transcription start site region 92560
Tssr92561 10 19934180 to 19934198 18 + TSS region transcription start site region 92561
Tssr92562 10 19934234 to 19934286 52 + TSS region transcription start site region 92562
Tssr92563 10 19934292 to 19934317 25 + TSS region transcription start site region 92563
Map3k5 10 19934472 to 20142753 208281 + protein coding gene mitogen-activated protein kinase kinase kinase 5
Tssr3152 10 19939481 to 19939492 11 + TSS region transcription start site region 3152
Tssr3153 10 19939521 to 19939530 9 + TSS region transcription start site region 3153