Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:19552570-19920053

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr96915 10 19577562 to 19577589 27 - TSS region transcription start site region 96915
Tssr96916 10 19583095 to 19583109 14 - TSS region transcription start site region 96916
Tssr96917 10 19584236 to 19584253 17 - TSS region transcription start site region 96917
Tssr3148 10 19589686 to 19589698 12 + TSS region transcription start site region 3148
Tssr96918 10 19591470 to 19591476 6 - TSS region transcription start site region 96918
Cpgi1342 10 19591657 to 19592410 753 CpG island CpG island 1342
Tssr96919 10 19591679 to 19591692 13 - TSS region transcription start site region 96919
Tssr96920 10 19591701 to 19591712 11 - TSS region transcription start site region 96920
Tssr96921 10 19591852 to 19591856 4 - TSS region transcription start site region 96921
Tssr92545 10 19591952 to 19592087 135 + TSS region transcription start site region 92545
Ifngr1 10 19591958 to 19610225 18267 + protein coding gene interferon gamma receptor 1
Tssr92546 10 19592422 to 19592448 26 + TSS region transcription start site region 92546
Tssr96922 10 19592744 to 19592773 29 - TSS region transcription start site region 96922
Tssr96923 10 19594596 to 19594616 20 - TSS region transcription start site region 96923
Tssr96924 10 19594688 to 19594701 13 - TSS region transcription start site region 96924
Tssr96925 10 19594718 to 19594735 17 - TSS region transcription start site region 96925
Tssr96926 10 19598168 to 19598183 15 - TSS region transcription start site region 96926
Tssr92547 10 19598388 to 19598393 5 + TSS region transcription start site region 92547
Tssr92548 10 19606226 to 19606278 52 + TSS region transcription start site region 92548
Tssr92549 10 19607258 to 19607286 28 + TSS region transcription start site region 92549
Tssr96927 10 19609202 to 19609214 12 - TSS region transcription start site region 96927
Tssr96928 10 19609223 to 19609246 23 - TSS region transcription start site region 96928
Tssr92550 10 19609226 to 19609285 59 + TSS region transcription start site region 92550
Tssr96929 10 19609278 to 19609299 21 - TSS region transcription start site region 96929
Tssr92551 10 19610013 to 19610015 2 + TSS region transcription start site region 92551
Tssr92552 10 19621992 to 19622004 12 + TSS region transcription start site region 92552
Tssr92553 10 19622014 to 19622035 21 + TSS region transcription start site region 92553
Il22ra2 10 19622028 to 19634681 12653 + protein coding gene interleukin 22 receptor, alpha 2
Tssr96930 10 19632171 to 19632174 3 - TSS region transcription start site region 96930
9230106D20Rik 10 19644750 to 19660801 16051 + lincRNA gene RIKEN cDNA 9230106D20 gene
Tssr3149 10 19644990 to 19644994 4 + TSS region transcription start site region 3149
Tssr92554 10 19679991 to 19679993 2 + TSS region transcription start site region 92554
Cpgi1343 10 19712505 to 19712802 297 CpG island CpG island 1343
Il20ra 10 19712570 to 19760053 47483 + protein coding gene interleukin 20 receptor, alpha
Gm33332 10 19716152 to 19718704 2552 - antisense lncRNA gene predicted gene, 33332
Tssr96931 10 19718686 to 19718723 37 - TSS region transcription start site region 96931
Tssr96932 10 19718782 to 19718794 12 - TSS region transcription start site region 96932
D10Csu1 10 19750280 to 19750721 441 DNA segment DNA segment, Chr 10, Central Connecticut State University 1
Gm25256 10 19782854 to 19782960 106 + snRNA gene predicted gene, 25256
Slc35d3 10 19847916 to 19851459 3543 - protein coding gene solute carrier family 35, member D3
Cpgi1344 10 19848955 to 19851976 3021 CpG island CpG island 1344
Tssr96933 10 19850882 to 19850895 13 - TSS region transcription start site region 96933
Tssr96934 10 19851208 to 19851221 13 - TSS region transcription start site region 96934
Tssr3150 10 19851419 to 19851442 23 - TSS region transcription start site region 3150
Tssr96935 10 19851512 to 19851568 56 - TSS region transcription start site region 96935
Tssr96936 10 19851598 to 19851611 13 - TSS region transcription start site region 96936
Pex7 10 19860090 to 19907674 47584 - protein coding gene peroxisomal biogenesis factor 7
Gm48714 10 19873007 to 19874447 1440 - unclassified gene predicted gene, 48714
Cpgi1345 10 19907028 to 19907771 743 CpG island CpG island 1345
Tssr96937 10 19907622 to 19907627 5 - TSS region transcription start site region 96937
Tssr96938 10 19907631 to 19907640 9 - TSS region transcription start site region 96938
Tssr96939 10 19907645 to 19907689 44 - TSS region transcription start site region 96939
D10Mit169 10 19910064 to 19910146 82 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 169