Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:19117952-19588330

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr96900 10 19122218 to 19122262 44 - TSS region transcription start site region 96900
Tssr96901 10 19122339 to 19122357 18 - TSS region transcription start site region 96901
Tssr92531 10 19122478 to 19122491 13 + TSS region transcription start site region 92531
Gm48546 10 19123207 to 19123436 229 + pseudogene predicted gene, 48546
Tssr92532 10 19141740 to 19141764 24 + TSS region transcription start site region 92532
Gm20139 10 19141751 to 19206702 64951 + lincRNA gene predicted gene, 20139
Tssr96902 10 19170687 to 19170696 9 - TSS region transcription start site region 96902
Tssr92533 10 19185157 to 19185173 16 + TSS region transcription start site region 92533
Tssr92534 10 19185209 to 19185224 15 + TSS region transcription start site region 92534
Tssr96903 10 19185843 to 19185848 5 - TSS region transcription start site region 96903
Tssr96904 10 19185857 to 19185876 19 - TSS region transcription start site region 96904
Tssr96905 10 19185884 to 19185900 16 - TSS region transcription start site region 96905
Tssr96906 10 19185901 to 19185911 10 - TSS region transcription start site region 96906
Tssr96907 10 19186451 to 19186456 5 - TSS region transcription start site region 96907
Tssr96908 10 19186460 to 19186471 11 - TSS region transcription start site region 96908
Tssr92535 10 19186576 to 19186598 22 + TSS region transcription start site region 92535
Tssr92536 10 19187308 to 19187341 33 + TSS region transcription start site region 92536
Tssr96909 10 19187561 to 19187588 27 - TSS region transcription start site region 96909
Tssr96910 10 19188476 to 19188544 68 - TSS region transcription start site region 96910
Tssr96911 10 19188651 to 19188660 9 - TSS region transcription start site region 96911
Gm40607 10 19235311 to 19243553 8242 - lncRNA gene predicted gene, 40607
Cpgi1339 10 19261939 to 19262143 204 CpG island CpG island 1339
Gm7213 10 19262034 to 19262983 949 + pseudogene predicted gene 7213
Gm33056 10 19290989 to 19325817 34828 + lincRNA gene predicted gene, 33056
Tssr96912 10 19321714 to 19321720 6 - TSS region transcription start site region 96912
Tssr92537 10 19352689 to 19352737 48 + TSS region transcription start site region 92537
Cpgi1340 10 19352952 to 19353330 378 CpG island CpG island 1340
Tssr92538 10 19356388 to 19356391 3 + TSS region transcription start site region 92538
Olig3 10 19356539 to 19358604 2065 + protein coding gene oligodendrocyte transcription factor 3
Tssr92539 10 19356558 to 19356565 7 + TSS region transcription start site region 92539
Cpgi1341 10 19356679 to 19357710 1031 CpG island CpG island 1341
D10Mit281 10 19444878 to 19444992 114 DNA segment DNA Segment, Chr 10 Massachusetts Institute of Technology 281
Tssr92540 10 19486688 to 19486729 41 + TSS region transcription start site region 92540
Gm33104 10 19486715 to 19507311 20596 + lincRNA gene predicted gene, 33104
Tssr92541 10 19494637 to 19494649 12 + TSS region transcription start site region 92541
Tssr92542 10 19494708 to 19494738 30 + TSS region transcription start site region 92542
Tssr96913 10 19506069 to 19506080 11 - TSS region transcription start site region 96913
Tssr96914 10 19506085 to 19506102 17 - TSS region transcription start site region 96914
Tssr92543 10 19506246 to 19506257 11 + TSS region transcription start site region 92543
Gm48563 10 19519302 to 19522650 3348 - unclassified gene predicted gene, 48563
Tssr92544 10 19531767 to 19531778 11 + TSS region transcription start site region 92544
Tssr96915 10 19577562 to 19577589 27 - TSS region transcription start site region 96915
Tssr96916 10 19583095 to 19583109 14 - TSS region transcription start site region 96916
Tssr96917 10 19584236 to 19584253 17 - TSS region transcription start site region 96917