Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:18620574-19390589

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139 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arfgef3 10 18588011 to 18743758 155747 - protein coding gene ARFGEF family member 3
D10Mit212 10 18631362 to 18631484 122 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 212
Tssr96840 10 18653731 to 18653737 6 - TSS region transcription start site region 96840
Tssr96841 10 18679088 to 18679091 3 - TSS region transcription start site region 96841
Cpgi1336 10 18743459 to 18744018 559 CpG island CpG island 1336
Gm32926 10 18743469 to 18837979 94510 + antisense lncRNA gene predicted gene, 32926
Tssr96842 10 18743672 to 18743684 12 - TSS region transcription start site region 96842
Tssr96843 10 18743691 to 18743760 69 - TSS region transcription start site region 96843
Tssr96844 10 18743911 to 18743972 61 - TSS region transcription start site region 96844
Gm4922 10 18779727 to 18786793 7066 - protein coding gene predicted gene 4922
Tssr96845 10 18786778 to 18786789 11 - TSS region transcription start site region 96845
Tssr96846 10 18789473 to 18789474 1 - TSS region transcription start site region 96846
4930444F02Rik 10 18797299 to 18831930 34631 - lincRNA gene RIKEN cDNA 4930444F02 gene
Tssr96847 10 18800435 to 18800440 5 - TSS region transcription start site region 96847
Tssr96848 10 18805066 to 18805070 4 - TSS region transcription start site region 96848
D10Mit168 10 18806716 to 18806860 144 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 168
Tssr96849 10 18831814 to 18831825 11 - TSS region transcription start site region 96849
Tssr96850 10 18831900 to 18831913 13 - TSS region transcription start site region 96850
Tssr96851 10 18831916 to 18831941 25 - TSS region transcription start site region 96851
Cpgi1337 10 18844513 to 18845547 1034 CpG island CpG island 1337
Tssr92499 10 18844966 to 18844977 11 + TSS region transcription start site region 92499
Tssr92500 10 18845012 to 18845023 11 + TSS region transcription start site region 92500
Tssr92501 10 18845056 to 18845067 11 + TSS region transcription start site region 92501
Perp 10 18845071 to 18857073 12002 + protein coding gene PERP, TP53 apoptosis effector
Tssr92502 10 18845075 to 18845082 7 + TSS region transcription start site region 92502
Tssr92503 10 18845096 to 18845112 16 + TSS region transcription start site region 92503
Tssr92504 10 18845124 to 18845139 15 + TSS region transcription start site region 92504
Tssr96852 10 18848021 to 18848032 11 - TSS region transcription start site region 96852
Tssr96853 10 18848063 to 18848070 7 - TSS region transcription start site region 96853
Tssr92505 10 18853567 to 18853618 51 + TSS region transcription start site region 92505
Tssr92506 10 18855787 to 18855816 29 + TSS region transcription start site region 92506
Gm48483 10 18879735 to 18887029 7294 - lincRNA gene predicted gene, 48483
Tssr92507 10 18917272 to 18917290 18 + TSS region transcription start site region 92507
Tssr96854 10 18941596 to 18941601 5 - TSS region transcription start site region 96854
Tssr92508 10 18943854 to 18943865 11 + TSS region transcription start site region 92508
Tssr3147 10 18953378 to 18953379 1 + TSS region transcription start site region 3147
Tssr96855 10 18957941 to 18957989 48 - TSS region transcription start site region 96855
Tssr96856 10 18996479 to 18996492 13 - TSS region transcription start site region 96856
Tnfaip3 10 19000910 to 19015410 14500 - protein coding gene tumor necrosis factor, alpha-induced protein 3
Tssr96857 10 19001570 to 19001610 40 - TSS region transcription start site region 96857
Tssr96858 10 19004960 to 19004976 16 - TSS region transcription start site region 96858
Tssr96859 10 19005009 to 19005021 12 - TSS region transcription start site region 96859
Tssr96860 10 19005574 to 19005589 15 - TSS region transcription start site region 96860
Tssr96861 10 19005598 to 19005609 11 - TSS region transcription start site region 96861
Tssr96862 10 19005680 to 19005691 11 - TSS region transcription start site region 96862
Tssr96863 10 19007886 to 19007900 14 - TSS region transcription start site region 96863
Tssr96864 10 19008373 to 19008394 21 - TSS region transcription start site region 96864
Tssr96865 10 19008703 to 19008707 4 - TSS region transcription start site region 96865
Tssr92509 10 19008880 to 19008892 12 + TSS region transcription start site region 92509
Tssr96866 10 19009234 to 19009249 15 - TSS region transcription start site region 96866
Tssr96867 10 19009430 to 19009442 12 - TSS region transcription start site region 96867
Tssr96868 10 19009478 to 19009484 6 - TSS region transcription start site region 96868
Tssr92510 10 19009599 to 19009614 15 + TSS region transcription start site region 92510
Tssr92511 10 19009656 to 19009677 21 + TSS region transcription start site region 92511
Tssr96869 10 19009693 to 19009711 18 - TSS region transcription start site region 96869
Tssr96870 10 19011800 to 19011811 11 - TSS region transcription start site region 96870
Tssr96871 10 19011812 to 19011823 11 - TSS region transcription start site region 96871
Tssr96872 10 19011897 to 19011913 16 - TSS region transcription start site region 96872
Tssr96873 10 19011932 to 19011941 9 - TSS region transcription start site region 96873
Tssr96874 10 19011948 to 19011973 25 - TSS region transcription start site region 96874
Tssr92512 10 19012083 to 19012104 21 + TSS region transcription start site region 92512
Tssr96875 10 19012168 to 19012184 16 - TSS region transcription start site region 96875
Tssr96876 10 19012542 to 19012547 5 - TSS region transcription start site region 96876
Tssr96877 10 19014535 to 19014548 13 - TSS region transcription start site region 96877
Tssr96878 10 19014549 to 19014589 40 - TSS region transcription start site region 96878
Cpgi1338 10 19014772 to 19015684 912 CpG island CpG island 1338
Tssr96879 10 19015204 to 19015209 5 - TSS region transcription start site region 96879
Tssr96880 10 19015259 to 19015271 12 - TSS region transcription start site region 96880
Tssr96881 10 19015278 to 19015300 22 - TSS region transcription start site region 96881
Tssr96882 10 19015303 to 19015317 14 - TSS region transcription start site region 96882
Tssr96883 10 19015347 to 19015379 32 - TSS region transcription start site region 96883
Tssr92513 10 19015573 to 19015588 15 + TSS region transcription start site region 92513
Tssr92514 10 19015697 to 19015707 10 + TSS region transcription start site region 92514
Tssr96884 10 19015868 to 19015872 4 - TSS region transcription start site region 96884
Tssr92515 10 19044176 to 19044189 13 + TSS region transcription start site region 92515
Tssr92516 10 19061366 to 19061368 2 + TSS region transcription start site region 92516
Tssr96885 10 19061881 to 19061892 11 - TSS region transcription start site region 96885
Tssr96886 10 19062111 to 19062114 3 - TSS region transcription start site region 96886
Tssr96887 10 19062128 to 19062137 9 - TSS region transcription start site region 96887
Tssr96888 10 19062138 to 19062158 20 - TSS region transcription start site region 96888
Tssr96889 10 19062166 to 19062183 17 - TSS region transcription start site region 96889
Tssr96890 10 19062195 to 19062200 5 - TSS region transcription start site region 96890
Tssr92517 10 19062636 to 19062646 10 + TSS region transcription start site region 92517
Tssr92518 10 19062692 to 19062702 10 + TSS region transcription start site region 92518
Tssr92519 10 19062741 to 19062756 15 + TSS region transcription start site region 92519
Tssr92520 10 19062757 to 19062787 30 + TSS region transcription start site region 92520
Tssr92521 10 19062807 to 19062816 9 + TSS region transcription start site region 92521
Tssr92522 10 19063772 to 19063780 8 + TSS region transcription start site region 92522
Tssr96891 10 19065152 to 19065163 11 - TSS region transcription start site region 96891
Tssr96892 10 19065164 to 19065171 7 - TSS region transcription start site region 96892
Tssr96893 10 19065205 to 19065217 12 - TSS region transcription start site region 96893
Tssr96894 10 19065260 to 19065269 9 - TSS region transcription start site region 96894
Tssr96895 10 19065295 to 19065310 15 - TSS region transcription start site region 96895
Tssr96896 10 19065367 to 19065372 5 - TSS region transcription start site region 96896
Tssr92523 10 19065492 to 19065503 11 + TSS region transcription start site region 92523
Tssr92524 10 19065505 to 19065510 5 + TSS region transcription start site region 92524
Tssr92525 10 19065527 to 19065543 16 + TSS region transcription start site region 92525
Tssr92526 10 19065613 to 19065619 6 + TSS region transcription start site region 92526
Tssr92527 10 19067271 to 19067282 11 + TSS region transcription start site region 92527
1700124M09Rik 10 19086626 to 19087228 602 - lincRNA gene RIKEN cDNA 1700124M09 gene
Tssr92528 10 19087306 to 19087315 9 + TSS region transcription start site region 92528
Tssr92529 10 19087339 to 19087344 5 + TSS region transcription start site region 92529
Gm48545 10 19094050 to 19101595 7545 - lincRNA gene predicted gene, 48545
Tpi-rs5 10 19101545 to 19102318 773 + pseudogene triosephosphate isomerase related sequence 5
Tssr96897 10 19117049 to 19117060 11 - TSS region transcription start site region 96897
Tssr96898 10 19117075 to 19117078 3 - TSS region transcription start site region 96898
Tssr96899 10 19117101 to 19117106 5 - TSS region transcription start site region 96899
Tssr92530 10 19117429 to 19117446 17 + TSS region transcription start site region 92530
Tssr96900 10 19122218 to 19122262 44 - TSS region transcription start site region 96900
Tssr96901 10 19122339 to 19122357 18 - TSS region transcription start site region 96901
Tssr92531 10 19122478 to 19122491 13 + TSS region transcription start site region 92531
Gm48546 10 19123207 to 19123436 229 + pseudogene predicted gene, 48546
Tssr92532 10 19141740 to 19141764 24 + TSS region transcription start site region 92532
Gm20139 10 19141751 to 19206702 64951 + lincRNA gene predicted gene, 20139
Tssr96902 10 19170687 to 19170696 9 - TSS region transcription start site region 96902
Tssr92533 10 19185157 to 19185173 16 + TSS region transcription start site region 92533
Tssr92534 10 19185209 to 19185224 15 + TSS region transcription start site region 92534
Tssr96903 10 19185843 to 19185848 5 - TSS region transcription start site region 96903
Tssr96904 10 19185857 to 19185876 19 - TSS region transcription start site region 96904
Tssr96905 10 19185884 to 19185900 16 - TSS region transcription start site region 96905
Tssr96906 10 19185901 to 19185911 10 - TSS region transcription start site region 96906
Tssr96907 10 19186451 to 19186456 5 - TSS region transcription start site region 96907
Tssr96908 10 19186460 to 19186471 11 - TSS region transcription start site region 96908
Tssr92535 10 19186576 to 19186598 22 + TSS region transcription start site region 92535
Tssr92536 10 19187308 to 19187341 33 + TSS region transcription start site region 92536
Tssr96909 10 19187561 to 19187588 27 - TSS region transcription start site region 96909
Tssr96910 10 19188476 to 19188544 68 - TSS region transcription start site region 96910
Tssr96911 10 19188651 to 19188660 9 - TSS region transcription start site region 96911
Gm40607 10 19235311 to 19243553 8242 - lncRNA gene predicted gene, 40607
Cpgi1339 10 19261939 to 19262143 204 CpG island CpG island 1339
Gm7213 10 19262034 to 19262983 949 + pseudogene predicted gene 7213
Gm33056 10 19290989 to 19325817 34828 + lincRNA gene predicted gene, 33056
Tssr96912 10 19321714 to 19321720 6 - TSS region transcription start site region 96912
Tssr92537 10 19352689 to 19352737 48 + TSS region transcription start site region 92537
Cpgi1340 10 19352952 to 19353330 378 CpG island CpG island 1340
Tssr92538 10 19356388 to 19356391 3 + TSS region transcription start site region 92538
Olig3 10 19356539 to 19358604 2065 + protein coding gene oligodendrocyte transcription factor 3
Tssr92539 10 19356558 to 19356565 7 + TSS region transcription start site region 92539
Cpgi1341 10 19356679 to 19357710 1031 CpG island CpG island 1341