Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:18521778-19051789

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94 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nhsl1 10 18318985 to 18533892 214907 + protein coding gene NHS-like 1
Tssr92494 10 18525937 to 18525954 17 + TSS region transcription start site region 92494
Tssr92495 10 18526336 to 18526339 3 + TSS region transcription start site region 92495
Cpgi1333 10 18526377 to 18526892 515 CpG island CpG island 1333
Tssr92496 10 18526617 to 18526626 9 + TSS region transcription start site region 92496
Cpgi1334 10 18531310 to 18531958 648 CpG island CpG island 1334
Tssr92497 10 18532704 to 18532708 4 + TSS region transcription start site region 92497
6330590E21Rik 10 18533888 to 18535243 1355 unclassified gene RIKEN cDNA 6330590E21 gene
Hebp2 10 18540123 to 18546076 5953 - protein coding gene heme binding protein 2
Cpgi1335 10 18545732 to 18546133 401 CpG island CpG island 1335
Tssr96833 10 18545771 to 18545778 7 - TSS region transcription start site region 96833
Tssr96834 10 18545793 to 18545806 13 - TSS region transcription start site region 96834
Tssr96835 10 18545847 to 18545858 11 - TSS region transcription start site region 96835
Tssr96836 10 18545880 to 18545931 51 - TSS region transcription start site region 96836
Tssr96837 10 18546016 to 18546030 14 - TSS region transcription start site region 96837
Tssr96838 10 18546049 to 18546084 35 - TSS region transcription start site region 96838
Gm48297 10 18565487 to 18565955 468 - pseudogene predicted gene, 48297
Arfgef3 10 18588011 to 18743758 155747 - protein coding gene ARFGEF family member 3
Tssr96839 10 18604977 to 18604983 6 - TSS region transcription start site region 96839
Tssr92498 10 18613457 to 18613465 8 + TSS region transcription start site region 92498
D10Mit212 10 18631362 to 18631484 122 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 212
Tssr96840 10 18653731 to 18653737 6 - TSS region transcription start site region 96840
Tssr96841 10 18679088 to 18679091 3 - TSS region transcription start site region 96841
Cpgi1336 10 18743459 to 18744018 559 CpG island CpG island 1336
Gm32926 10 18743469 to 18837979 94510 + antisense lncRNA gene predicted gene, 32926
Tssr96842 10 18743672 to 18743684 12 - TSS region transcription start site region 96842
Tssr96843 10 18743691 to 18743760 69 - TSS region transcription start site region 96843
Tssr96844 10 18743911 to 18743972 61 - TSS region transcription start site region 96844
Gm4922 10 18779727 to 18786793 7066 - protein coding gene predicted gene 4922
Tssr96845 10 18786778 to 18786789 11 - TSS region transcription start site region 96845
Tssr96846 10 18789473 to 18789474 1 - TSS region transcription start site region 96846
4930444F02Rik 10 18797299 to 18831930 34631 - lincRNA gene RIKEN cDNA 4930444F02 gene
Tssr96847 10 18800435 to 18800440 5 - TSS region transcription start site region 96847
Tssr96848 10 18805066 to 18805070 4 - TSS region transcription start site region 96848
D10Mit168 10 18806716 to 18806860 144 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 168
Tssr96849 10 18831814 to 18831825 11 - TSS region transcription start site region 96849
Tssr96850 10 18831900 to 18831913 13 - TSS region transcription start site region 96850
Tssr96851 10 18831916 to 18831941 25 - TSS region transcription start site region 96851
Cpgi1337 10 18844513 to 18845547 1034 CpG island CpG island 1337
Tssr92499 10 18844966 to 18844977 11 + TSS region transcription start site region 92499
Tssr92500 10 18845012 to 18845023 11 + TSS region transcription start site region 92500
Tssr92501 10 18845056 to 18845067 11 + TSS region transcription start site region 92501
Perp 10 18845071 to 18857073 12002 + protein coding gene PERP, TP53 apoptosis effector
Tssr92502 10 18845075 to 18845082 7 + TSS region transcription start site region 92502
Tssr92503 10 18845096 to 18845112 16 + TSS region transcription start site region 92503
Tssr92504 10 18845124 to 18845139 15 + TSS region transcription start site region 92504
Tssr96852 10 18848021 to 18848032 11 - TSS region transcription start site region 96852
Tssr96853 10 18848063 to 18848070 7 - TSS region transcription start site region 96853
Tssr92505 10 18853567 to 18853618 51 + TSS region transcription start site region 92505
Tssr92506 10 18855787 to 18855816 29 + TSS region transcription start site region 92506
Gm48483 10 18879735 to 18887029 7294 - lincRNA gene predicted gene, 48483
Tssr92507 10 18917272 to 18917290 18 + TSS region transcription start site region 92507
Tssr96854 10 18941596 to 18941601 5 - TSS region transcription start site region 96854
Tssr92508 10 18943854 to 18943865 11 + TSS region transcription start site region 92508
Tssr3147 10 18953378 to 18953379 1 + TSS region transcription start site region 3147
Tssr96855 10 18957941 to 18957989 48 - TSS region transcription start site region 96855
Tssr96856 10 18996479 to 18996492 13 - TSS region transcription start site region 96856
Tnfaip3 10 19000910 to 19015410 14500 - protein coding gene tumor necrosis factor, alpha-induced protein 3
Tssr96857 10 19001570 to 19001610 40 - TSS region transcription start site region 96857
Tssr96858 10 19004960 to 19004976 16 - TSS region transcription start site region 96858
Tssr96859 10 19005009 to 19005021 12 - TSS region transcription start site region 96859
Tssr96860 10 19005574 to 19005589 15 - TSS region transcription start site region 96860
Tssr96861 10 19005598 to 19005609 11 - TSS region transcription start site region 96861
Tssr96862 10 19005680 to 19005691 11 - TSS region transcription start site region 96862
Tssr96863 10 19007886 to 19007900 14 - TSS region transcription start site region 96863
Tssr96864 10 19008373 to 19008394 21 - TSS region transcription start site region 96864
Tssr96865 10 19008703 to 19008707 4 - TSS region transcription start site region 96865
Tssr92509 10 19008880 to 19008892 12 + TSS region transcription start site region 92509
Tssr96866 10 19009234 to 19009249 15 - TSS region transcription start site region 96866
Tssr96867 10 19009430 to 19009442 12 - TSS region transcription start site region 96867
Tssr96868 10 19009478 to 19009484 6 - TSS region transcription start site region 96868
Tssr92510 10 19009599 to 19009614 15 + TSS region transcription start site region 92510
Tssr92511 10 19009656 to 19009677 21 + TSS region transcription start site region 92511
Tssr96869 10 19009693 to 19009711 18 - TSS region transcription start site region 96869
Tssr96870 10 19011800 to 19011811 11 - TSS region transcription start site region 96870
Tssr96871 10 19011812 to 19011823 11 - TSS region transcription start site region 96871
Tssr96872 10 19011897 to 19011913 16 - TSS region transcription start site region 96872
Tssr96873 10 19011932 to 19011941 9 - TSS region transcription start site region 96873
Tssr96874 10 19011948 to 19011973 25 - TSS region transcription start site region 96874
Tssr92512 10 19012083 to 19012104 21 + TSS region transcription start site region 92512
Tssr96875 10 19012168 to 19012184 16 - TSS region transcription start site region 96875
Tssr96876 10 19012542 to 19012547 5 - TSS region transcription start site region 96876
Tssr96877 10 19014535 to 19014548 13 - TSS region transcription start site region 96877
Tssr96878 10 19014549 to 19014589 40 - TSS region transcription start site region 96878
Cpgi1338 10 19014772 to 19015684 912 CpG island CpG island 1338
Tssr96879 10 19015204 to 19015209 5 - TSS region transcription start site region 96879
Tssr96880 10 19015259 to 19015271 12 - TSS region transcription start site region 96880
Tssr96881 10 19015278 to 19015300 22 - TSS region transcription start site region 96881
Tssr96882 10 19015303 to 19015317 14 - TSS region transcription start site region 96882
Tssr96883 10 19015347 to 19015379 32 - TSS region transcription start site region 96883
Tssr92513 10 19015573 to 19015588 15 + TSS region transcription start site region 92513
Tssr92514 10 19015697 to 19015707 10 + TSS region transcription start site region 92514
Tssr96884 10 19015868 to 19015872 4 - TSS region transcription start site region 96884
Tssr92515 10 19044176 to 19044189 13 + TSS region transcription start site region 92515