Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:18419977-18789983

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nhsl1 10 18318985 to 18533892 214907 + protein coding gene NHS-like 1
Gm38480 10 18414020 to 18423180 9160 + lncRNA gene predicted gene, 38480
Cpgi1331 10 18430924 to 18431233 309 CpG island CpG island 1331
Tssr92481 10 18431177 to 18431186 9 + TSS region transcription start site region 92481
Tssr92482 10 18431205 to 18431238 33 + TSS region transcription start site region 92482
Tssr92483 10 18431243 to 18431265 22 + TSS region transcription start site region 92483
Tssr92484 10 18431267 to 18431282 15 + TSS region transcription start site region 92484
Tssr92485 10 18431292 to 18431304 12 + TSS region transcription start site region 92485
Tssr92486 10 18431457 to 18431463 6 + TSS region transcription start site region 92486
Tssr92487 10 18447325 to 18447329 4 + TSS region transcription start site region 92487
Cpgi1332 10 18463102 to 18463300 198 CpG island CpG island 1332
Tssr92488 10 18469877 to 18469878 1 + TSS region transcription start site region 92488
Tssr92489 10 18469903 to 18469910 7 + TSS region transcription start site region 92489
Tssr92490 10 18469938 to 18469949 11 + TSS region transcription start site region 92490
Tssr92491 10 18469958 to 18469974 16 + TSS region transcription start site region 92491
Tssr92492 10 18475834 to 18475838 4 + TSS region transcription start site region 92492
Tssr92493 10 18508839 to 18508849 10 + TSS region transcription start site region 92493
Tssr92494 10 18525937 to 18525954 17 + TSS region transcription start site region 92494
Tssr92495 10 18526336 to 18526339 3 + TSS region transcription start site region 92495
Cpgi1333 10 18526377 to 18526892 515 CpG island CpG island 1333
Tssr92496 10 18526617 to 18526626 9 + TSS region transcription start site region 92496
Cpgi1334 10 18531310 to 18531958 648 CpG island CpG island 1334
Tssr92497 10 18532704 to 18532708 4 + TSS region transcription start site region 92497
6330590E21Rik 10 18533888 to 18535243 1355 unclassified gene RIKEN cDNA 6330590E21 gene
Hebp2 10 18540123 to 18546076 5953 - protein coding gene heme binding protein 2
Cpgi1335 10 18545732 to 18546133 401 CpG island CpG island 1335
Tssr96833 10 18545771 to 18545778 7 - TSS region transcription start site region 96833
Tssr96834 10 18545793 to 18545806 13 - TSS region transcription start site region 96834
Tssr96835 10 18545847 to 18545858 11 - TSS region transcription start site region 96835
Tssr96836 10 18545880 to 18545931 51 - TSS region transcription start site region 96836
Tssr96837 10 18546016 to 18546030 14 - TSS region transcription start site region 96837
Tssr96838 10 18546049 to 18546084 35 - TSS region transcription start site region 96838
Gm48297 10 18565487 to 18565955 468 - pseudogene predicted gene, 48297
Arfgef3 10 18588011 to 18743758 155747 - protein coding gene ARFGEF family member 3
Tssr96839 10 18604977 to 18604983 6 - TSS region transcription start site region 96839
Tssr92498 10 18613457 to 18613465 8 + TSS region transcription start site region 92498
D10Mit212 10 18631362 to 18631484 122 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 212
Tssr96840 10 18653731 to 18653737 6 - TSS region transcription start site region 96840
Tssr96841 10 18679088 to 18679091 3 - TSS region transcription start site region 96841
Cpgi1336 10 18743459 to 18744018 559 CpG island CpG island 1336
Gm32926 10 18743469 to 18837979 94510 + antisense lncRNA gene predicted gene, 32926
Tssr96842 10 18743672 to 18743684 12 - TSS region transcription start site region 96842
Tssr96843 10 18743691 to 18743760 69 - TSS region transcription start site region 96843
Tssr96844 10 18743911 to 18743972 61 - TSS region transcription start site region 96844
Gm4922 10 18779727 to 18786793 7066 - protein coding gene predicted gene 4922
Tssr96845 10 18786778 to 18786789 11 - TSS region transcription start site region 96845
Tssr96846 10 18789473 to 18789474 1 - TSS region transcription start site region 96846