Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:18124977-19084983

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166 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Reps1 10 18055861 to 18125155 69294 + protein coding gene RalBP1 associated Eps domain containing protein
Ect2l 10 18128903 to 18210890 81987 - protein coding gene epithelial cell transforming sequence 2 oncogene-like
Tssr96827 10 18210819 to 18210831 12 - TSS region transcription start site region 96827
Ccdc28a 10 18213685 to 18234981 21296 - protein coding gene coiled-coil domain containing 28A
Cpgi1328 10 18213734 to 18214222 488 CpG island CpG island 1328
Tssr96828 10 18227518 to 18227525 7 - TSS region transcription start site region 96828
Cpgi1329 10 18234775 to 18235557 782 CpG island CpG island 1329
Tssr96829 10 18234890 to 18234913 23 - TSS region transcription start site region 96829
Tssr96830 10 18234930 to 18235008 78 - TSS region transcription start site region 96830
Tssr92471 10 18235030 to 18235054 24 + TSS region transcription start site region 92471
Gm10827 10 18235053 to 18246019 10966 + lincRNA gene predicted gene 10827
Tssr96831 10 18235559 to 18235568 9 - TSS region transcription start site region 96831
Tssr3146 10 18235591 to 18235594 3 - TSS region transcription start site region 3146
Tssr96832 10 18235595 to 18235606 11 - TSS region transcription start site region 96832
Tssr92472 10 18251606 to 18251614 8 + TSS region transcription start site region 92472
Gm48229 10 18302669 to 18303062 393 - pseudogene predicted gene, 48229
Cpgi1330 10 18318168 to 18319732 1564 CpG island CpG island 1330
Tssr92473 10 18318597 to 18318622 25 + TSS region transcription start site region 92473
Tssr92474 10 18318633 to 18318725 92 + TSS region transcription start site region 92474
Nhsl1 10 18318985 to 18533892 214907 + protein coding gene NHS-like 1
Gm18942 10 18336121 to 18337241 1120 - pseudogene predicted gene, 18942
Tssr92475 10 18356318 to 18356323 5 + TSS region transcription start site region 92475
Tssr92476 10 18361002 to 18361004 2 + TSS region transcription start site region 92476
D10Mit146.1 10 18383492 to 18383605 113 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 146.1
D10Mit189 10 18383585 to 18383689 104 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 189
D10Mit146 10 18383585 to 18383681 96 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 146
D10Mit167.2 10 18383645 to 18383763 118 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 167.2
Tssr92477 10 18407626 to 18407650 24 + TSS region transcription start site region 92477
Tssr92478 10 18407658 to 18407715 57 + TSS region transcription start site region 92478
Tssr92479 10 18407778 to 18407783 5 + TSS region transcription start site region 92479
Tssr92480 10 18407836 to 18407855 19 + TSS region transcription start site region 92480
Gm38480 10 18414020 to 18423180 9160 + lncRNA gene predicted gene, 38480
Cpgi1331 10 18430924 to 18431233 309 CpG island CpG island 1331
Tssr92481 10 18431177 to 18431186 9 + TSS region transcription start site region 92481
Tssr92482 10 18431205 to 18431238 33 + TSS region transcription start site region 92482
Tssr92483 10 18431243 to 18431265 22 + TSS region transcription start site region 92483
Tssr92484 10 18431267 to 18431282 15 + TSS region transcription start site region 92484
Tssr92485 10 18431292 to 18431304 12 + TSS region transcription start site region 92485
Tssr92486 10 18431457 to 18431463 6 + TSS region transcription start site region 92486
Tssr92487 10 18447325 to 18447329 4 + TSS region transcription start site region 92487
Cpgi1332 10 18463102 to 18463300 198 CpG island CpG island 1332
Tssr92488 10 18469877 to 18469878 1 + TSS region transcription start site region 92488
Tssr92489 10 18469903 to 18469910 7 + TSS region transcription start site region 92489
Tssr92490 10 18469938 to 18469949 11 + TSS region transcription start site region 92490
Tssr92491 10 18469958 to 18469974 16 + TSS region transcription start site region 92491
Tssr92492 10 18475834 to 18475838 4 + TSS region transcription start site region 92492
Tssr92493 10 18508839 to 18508849 10 + TSS region transcription start site region 92493
Tssr92494 10 18525937 to 18525954 17 + TSS region transcription start site region 92494
Tssr92495 10 18526336 to 18526339 3 + TSS region transcription start site region 92495
Cpgi1333 10 18526377 to 18526892 515 CpG island CpG island 1333
Tssr92496 10 18526617 to 18526626 9 + TSS region transcription start site region 92496
Cpgi1334 10 18531310 to 18531958 648 CpG island CpG island 1334
Tssr92497 10 18532704 to 18532708 4 + TSS region transcription start site region 92497
6330590E21Rik 10 18533888 to 18535243 1355 unclassified gene RIKEN cDNA 6330590E21 gene
Hebp2 10 18540123 to 18546076 5953 - protein coding gene heme binding protein 2
Cpgi1335 10 18545732 to 18546133 401 CpG island CpG island 1335
Tssr96833 10 18545771 to 18545778 7 - TSS region transcription start site region 96833
Tssr96834 10 18545793 to 18545806 13 - TSS region transcription start site region 96834
Tssr96835 10 18545847 to 18545858 11 - TSS region transcription start site region 96835
Tssr96836 10 18545880 to 18545931 51 - TSS region transcription start site region 96836
Tssr96837 10 18546016 to 18546030 14 - TSS region transcription start site region 96837
Tssr96838 10 18546049 to 18546084 35 - TSS region transcription start site region 96838
Gm48297 10 18565487 to 18565955 468 - pseudogene predicted gene, 48297
Arfgef3 10 18588011 to 18743758 155747 - protein coding gene ARFGEF family member 3
Tssr96839 10 18604977 to 18604983 6 - TSS region transcription start site region 96839
Tssr92498 10 18613457 to 18613465 8 + TSS region transcription start site region 92498
D10Mit212 10 18631362 to 18631484 122 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 212
Tssr96840 10 18653731 to 18653737 6 - TSS region transcription start site region 96840
Tssr96841 10 18679088 to 18679091 3 - TSS region transcription start site region 96841
Cpgi1336 10 18743459 to 18744018 559 CpG island CpG island 1336
Gm32926 10 18743469 to 18837979 94510 + antisense lncRNA gene predicted gene, 32926
Tssr96842 10 18743672 to 18743684 12 - TSS region transcription start site region 96842
Tssr96843 10 18743691 to 18743760 69 - TSS region transcription start site region 96843
Tssr96844 10 18743911 to 18743972 61 - TSS region transcription start site region 96844
Gm4922 10 18779727 to 18786793 7066 - protein coding gene predicted gene 4922
Tssr96845 10 18786778 to 18786789 11 - TSS region transcription start site region 96845
Tssr96846 10 18789473 to 18789474 1 - TSS region transcription start site region 96846
4930444F02Rik 10 18797299 to 18831930 34631 - lincRNA gene RIKEN cDNA 4930444F02 gene
Tssr96847 10 18800435 to 18800440 5 - TSS region transcription start site region 96847
Tssr96848 10 18805066 to 18805070 4 - TSS region transcription start site region 96848
D10Mit168 10 18806716 to 18806860 144 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 168
Tssr96849 10 18831814 to 18831825 11 - TSS region transcription start site region 96849
Tssr96850 10 18831900 to 18831913 13 - TSS region transcription start site region 96850
Tssr96851 10 18831916 to 18831941 25 - TSS region transcription start site region 96851
Cpgi1337 10 18844513 to 18845547 1034 CpG island CpG island 1337
Tssr92499 10 18844966 to 18844977 11 + TSS region transcription start site region 92499
Tssr92500 10 18845012 to 18845023 11 + TSS region transcription start site region 92500
Tssr92501 10 18845056 to 18845067 11 + TSS region transcription start site region 92501
Perp 10 18845071 to 18857073 12002 + protein coding gene PERP, TP53 apoptosis effector
Tssr92502 10 18845075 to 18845082 7 + TSS region transcription start site region 92502
Tssr92503 10 18845096 to 18845112 16 + TSS region transcription start site region 92503
Tssr92504 10 18845124 to 18845139 15 + TSS region transcription start site region 92504
Tssr96852 10 18848021 to 18848032 11 - TSS region transcription start site region 96852
Tssr96853 10 18848063 to 18848070 7 - TSS region transcription start site region 96853
Tssr92505 10 18853567 to 18853618 51 + TSS region transcription start site region 92505
Tssr92506 10 18855787 to 18855816 29 + TSS region transcription start site region 92506
Gm48483 10 18879735 to 18887029 7294 - lincRNA gene predicted gene, 48483
Tssr92507 10 18917272 to 18917290 18 + TSS region transcription start site region 92507
Tssr96854 10 18941596 to 18941601 5 - TSS region transcription start site region 96854
Tssr92508 10 18943854 to 18943865 11 + TSS region transcription start site region 92508
Tssr3147 10 18953378 to 18953379 1 + TSS region transcription start site region 3147
Tssr96855 10 18957941 to 18957989 48 - TSS region transcription start site region 96855
Tssr96856 10 18996479 to 18996492 13 - TSS region transcription start site region 96856
Tnfaip3 10 19000910 to 19015410 14500 - protein coding gene tumor necrosis factor, alpha-induced protein 3
Tssr96857 10 19001570 to 19001610 40 - TSS region transcription start site region 96857
Tssr96858 10 19004960 to 19004976 16 - TSS region transcription start site region 96858
Tssr96859 10 19005009 to 19005021 12 - TSS region transcription start site region 96859
Tssr96860 10 19005574 to 19005589 15 - TSS region transcription start site region 96860
Tssr96861 10 19005598 to 19005609 11 - TSS region transcription start site region 96861
Tssr96862 10 19005680 to 19005691 11 - TSS region transcription start site region 96862
Tssr96863 10 19007886 to 19007900 14 - TSS region transcription start site region 96863
Tssr96864 10 19008373 to 19008394 21 - TSS region transcription start site region 96864
Tssr96865 10 19008703 to 19008707 4 - TSS region transcription start site region 96865
Tssr92509 10 19008880 to 19008892 12 + TSS region transcription start site region 92509
Tssr96866 10 19009234 to 19009249 15 - TSS region transcription start site region 96866
Tssr96867 10 19009430 to 19009442 12 - TSS region transcription start site region 96867
Tssr96868 10 19009478 to 19009484 6 - TSS region transcription start site region 96868
Tssr92510 10 19009599 to 19009614 15 + TSS region transcription start site region 92510
Tssr92511 10 19009656 to 19009677 21 + TSS region transcription start site region 92511
Tssr96869 10 19009693 to 19009711 18 - TSS region transcription start site region 96869
Tssr96870 10 19011800 to 19011811 11 - TSS region transcription start site region 96870
Tssr96871 10 19011812 to 19011823 11 - TSS region transcription start site region 96871
Tssr96872 10 19011897 to 19011913 16 - TSS region transcription start site region 96872
Tssr96873 10 19011932 to 19011941 9 - TSS region transcription start site region 96873
Tssr96874 10 19011948 to 19011973 25 - TSS region transcription start site region 96874
Tssr92512 10 19012083 to 19012104 21 + TSS region transcription start site region 92512
Tssr96875 10 19012168 to 19012184 16 - TSS region transcription start site region 96875
Tssr96876 10 19012542 to 19012547 5 - TSS region transcription start site region 96876
Tssr96877 10 19014535 to 19014548 13 - TSS region transcription start site region 96877
Tssr96878 10 19014549 to 19014589 40 - TSS region transcription start site region 96878
Cpgi1338 10 19014772 to 19015684 912 CpG island CpG island 1338
Tssr96879 10 19015204 to 19015209 5 - TSS region transcription start site region 96879
Tssr96880 10 19015259 to 19015271 12 - TSS region transcription start site region 96880
Tssr96881 10 19015278 to 19015300 22 - TSS region transcription start site region 96881
Tssr96882 10 19015303 to 19015317 14 - TSS region transcription start site region 96882
Tssr96883 10 19015347 to 19015379 32 - TSS region transcription start site region 96883
Tssr92513 10 19015573 to 19015588 15 + TSS region transcription start site region 92513
Tssr92514 10 19015697 to 19015707 10 + TSS region transcription start site region 92514
Tssr96884 10 19015868 to 19015872 4 - TSS region transcription start site region 96884
Tssr92515 10 19044176 to 19044189 13 + TSS region transcription start site region 92515
Tssr92516 10 19061366 to 19061368 2 + TSS region transcription start site region 92516
Tssr96885 10 19061881 to 19061892 11 - TSS region transcription start site region 96885
Tssr96886 10 19062111 to 19062114 3 - TSS region transcription start site region 96886
Tssr96887 10 19062128 to 19062137 9 - TSS region transcription start site region 96887
Tssr96888 10 19062138 to 19062158 20 - TSS region transcription start site region 96888
Tssr96889 10 19062166 to 19062183 17 - TSS region transcription start site region 96889
Tssr96890 10 19062195 to 19062200 5 - TSS region transcription start site region 96890
Tssr92517 10 19062636 to 19062646 10 + TSS region transcription start site region 92517
Tssr92518 10 19062692 to 19062702 10 + TSS region transcription start site region 92518
Tssr92519 10 19062741 to 19062756 15 + TSS region transcription start site region 92519
Tssr92520 10 19062757 to 19062787 30 + TSS region transcription start site region 92520
Tssr92521 10 19062807 to 19062816 9 + TSS region transcription start site region 92521
Tssr92522 10 19063772 to 19063780 8 + TSS region transcription start site region 92522
Tssr96891 10 19065152 to 19065163 11 - TSS region transcription start site region 96891
Tssr96892 10 19065164 to 19065171 7 - TSS region transcription start site region 96892
Tssr96893 10 19065205 to 19065217 12 - TSS region transcription start site region 96893
Tssr96894 10 19065260 to 19065269 9 - TSS region transcription start site region 96894
Tssr96895 10 19065295 to 19065310 15 - TSS region transcription start site region 96895
Tssr96896 10 19065367 to 19065372 5 - TSS region transcription start site region 96896
Tssr92523 10 19065492 to 19065503 11 + TSS region transcription start site region 92523
Tssr92524 10 19065505 to 19065510 5 + TSS region transcription start site region 92524
Tssr92525 10 19065527 to 19065543 16 + TSS region transcription start site region 92525
Tssr92526 10 19065613 to 19065619 6 + TSS region transcription start site region 92526
Tssr92527 10 19067271 to 19067282 11 + TSS region transcription start site region 92527
Gn 10 118150744 to 18383585 -99767159 heritable phenotypic marker gentoo
Scc9 10 125739363 to 18383585 -107355778 QTL colon tumor susceptibility 9