Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:18091606-18411614

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Reps1 10 18055861 to 18125155 69294 + protein coding gene RalBP1 associated Eps domain containing protein
Tssr96826 10 18094361 to 18094366 5 - TSS region transcription start site region 96826
Tssr92470 10 18105768 to 18105772 4 + TSS region transcription start site region 92470
Ect2l 10 18128903 to 18210890 81987 - protein coding gene epithelial cell transforming sequence 2 oncogene-like
Tssr96827 10 18210819 to 18210831 12 - TSS region transcription start site region 96827
Ccdc28a 10 18213685 to 18234981 21296 - protein coding gene coiled-coil domain containing 28A
Cpgi1328 10 18213734 to 18214222 488 CpG island CpG island 1328
Tssr96828 10 18227518 to 18227525 7 - TSS region transcription start site region 96828
Cpgi1329 10 18234775 to 18235557 782 CpG island CpG island 1329
Tssr96829 10 18234890 to 18234913 23 - TSS region transcription start site region 96829
Tssr96830 10 18234930 to 18235008 78 - TSS region transcription start site region 96830
Tssr92471 10 18235030 to 18235054 24 + TSS region transcription start site region 92471
Gm10827 10 18235053 to 18246019 10966 + lincRNA gene predicted gene 10827
Tssr96831 10 18235559 to 18235568 9 - TSS region transcription start site region 96831
Tssr3146 10 18235591 to 18235594 3 - TSS region transcription start site region 3146
Tssr96832 10 18235595 to 18235606 11 - TSS region transcription start site region 96832
Tssr92472 10 18251606 to 18251614 8 + TSS region transcription start site region 92472
Gm48229 10 18302669 to 18303062 393 - pseudogene predicted gene, 48229
Cpgi1330 10 18318168 to 18319732 1564 CpG island CpG island 1330
Tssr92473 10 18318597 to 18318622 25 + TSS region transcription start site region 92473
Tssr92474 10 18318633 to 18318725 92 + TSS region transcription start site region 92474
Nhsl1 10 18318985 to 18533892 214907 + protein coding gene NHS-like 1
Gm18942 10 18336121 to 18337241 1120 - pseudogene predicted gene, 18942
Tssr92475 10 18356318 to 18356323 5 + TSS region transcription start site region 92475
Tssr92476 10 18361002 to 18361004 2 + TSS region transcription start site region 92476
D10Mit146.1 10 18383492 to 18383605 113 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 146.1
D10Mit189 10 18383585 to 18383689 104 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 189
D10Mit146 10 18383585 to 18383681 96 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 146
D10Mit167.2 10 18383645 to 18383763 118 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 167.2
Tssr92477 10 18407626 to 18407650 24 + TSS region transcription start site region 92477
Tssr92478 10 18407658 to 18407715 57 + TSS region transcription start site region 92478
Tssr92479 10 18407778 to 18407783 5 + TSS region transcription start site region 92479
Tssr92480 10 18407836 to 18407855 19 + TSS region transcription start site region 92480
Gn 10 118150744 to 18383585 -99767159 heritable phenotypic marker gentoo
Scc9 10 125739363 to 18383585 -107355778 QTL colon tumor susceptibility 9