Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:17924361-18264366

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Heca 10 17899040 to 17948067 49027 - protein coding gene hdc homolog, cell cycle regulator
Tssr96821 10 17924417 to 17924419 2 - TSS region transcription start site region 96821
Tssr96822 10 17944349 to 17944354 5 - TSS region transcription start site region 96822
Cpgi1325 10 17947090 to 17948589 1499 CpG island CpG island 1325
Tssr3145 10 17947462 to 17947482 20 + TSS region transcription start site region 3145
Tssr92461 10 17947496 to 17947511 15 + TSS region transcription start site region 92461
Tssr96823 10 17947997 to 17948098 101 - TSS region transcription start site region 96823
Abracl 10 18011260 to 18023252 11992 - protein coding gene ABRA C-terminal like
Gm17711 10 18011268 to 18011505 237 + pseudogene predicted gene, 17711
Cpgi1326 10 18022308 to 18023411 1103 CpG island CpG island 1326
Tssr92462 10 18022964 to 18022969 5 + TSS region transcription start site region 92462
Tssr96824 10 18023122 to 18023225 103 - TSS region transcription start site region 96824
Tssr96825 10 18023229 to 18023265 36 - TSS region transcription start site region 96825
Cpgi1327 10 18054998 to 18056474 1476 CpG island CpG island 1327
Tssr92463 10 18055520 to 18055595 75 + TSS region transcription start site region 92463
Tssr92464 10 18055598 to 18055611 13 + TSS region transcription start site region 92464
Tssr92465 10 18055711 to 18055790 79 + TSS region transcription start site region 92465
Tssr92466 10 18055793 to 18055815 22 + TSS region transcription start site region 92466
Reps1 10 18055861 to 18125155 69294 + protein coding gene RalBP1 associated Eps domain containing protein
Tssr92467 10 18077496 to 18077504 8 + TSS region transcription start site region 92467
Tssr92468 10 18077551 to 18077575 24 + TSS region transcription start site region 92468
Tssr92469 10 18085718 to 18085719 1 + TSS region transcription start site region 92469
Tssr96826 10 18094361 to 18094366 5 - TSS region transcription start site region 96826
Tssr92470 10 18105768 to 18105772 4 + TSS region transcription start site region 92470
Ect2l 10 18128903 to 18210890 81987 - protein coding gene epithelial cell transforming sequence 2 oncogene-like
Tssr96827 10 18210819 to 18210831 12 - TSS region transcription start site region 96827
Ccdc28a 10 18213685 to 18234981 21296 - protein coding gene coiled-coil domain containing 28A
Cpgi1328 10 18213734 to 18214222 488 CpG island CpG island 1328
Tssr96828 10 18227518 to 18227525 7 - TSS region transcription start site region 96828
Cpgi1329 10 18234775 to 18235557 782 CpG island CpG island 1329
Tssr96829 10 18234890 to 18234913 23 - TSS region transcription start site region 96829
Tssr96830 10 18234930 to 18235008 78 - TSS region transcription start site region 96830
Tssr92471 10 18235030 to 18235054 24 + TSS region transcription start site region 92471
Gm10827 10 18235053 to 18246019 10966 + lincRNA gene predicted gene 10827
Tssr96831 10 18235559 to 18235568 9 - TSS region transcription start site region 96831
Tssr3146 10 18235591 to 18235594 3 - TSS region transcription start site region 3146
Tssr96832 10 18235595 to 18235606 11 - TSS region transcription start site region 96832
Tssr92472 10 18251606 to 18251614 8 + TSS region transcription start site region 92472