Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:16728085-17913228

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D10Mit104 10 16728764 to 16728901 137 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 104
Gm5948 10 16768940 to 16769769 829 + pseudogene predicted gene 5948
Gm18039 10 16785734 to 16786369 635 - pseudogene predicted gene, 18039
Gm47736 10 16796973 to 16797898 925 + pseudogene predicted gene, 47736
Gm20125 10 16951094 to 17095782 144688 - lncRNA gene predicted gene, 20125
Gm6765 10 17048979 to 17049523 544 - pseudogene predicted gene 6765
Gm25382 10 17116804 to 17116900 96 + snRNA gene predicted gene, 25382
Gm47760 10 17294698 to 17332877 38179 - lincRNA gene predicted gene, 47760
Gm47761 10 17318085 to 17323228 5143 - lincRNA gene predicted gene, 47761
Tssr92441 10 17476851 to 17476885 34 + TSS region transcription start site region 92441
Tssr92442 10 17476993 to 17477004 11 + TSS region transcription start site region 92442
Tssr96811 10 17495963 to 17495985 22 - TSS region transcription start site region 96811
Gm32543 10 17512080 to 17680892 168812 - lncRNA gene predicted gene, 32543
Gm47769 10 17512114 to 17520608 8494 - lincRNA gene predicted gene, 47769
Gm47768 10 17514730 to 17514944 214 + pseudogene predicted gene, 47768
Gm47770 10 17522613 to 17526914 4301 - lincRNA gene predicted gene, 47770
Gm47771 10 17562743 to 17658513 95770 - lincRNA gene predicted gene, 47771
Cpgi1323 10 17634045 to 17634276 231 CpG island CpG island 1323
Gm32656 10 17659913 to 17678733 18820 + lncRNA gene predicted gene, 32656
Tssr96812 10 17696574 to 17696578 4 - TSS region transcription start site region 96812
Cpgi1324 10 17722023 to 17724793 2770 CpG island CpG island 1324
Tssr92443 10 17723220 to 17723229 9 + TSS region transcription start site region 92443
Cited2 10 17723228 to 17725674 2446 + protein coding gene Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
Tssr92444 10 17723973 to 17724011 38 + TSS region transcription start site region 92444
Tssr92445 10 17724025 to 17724045 20 + TSS region transcription start site region 92445
Tssr92446 10 17724180 to 17724193 13 + TSS region transcription start site region 92446
Tssr92447 10 17724211 to 17724230 19 + TSS region transcription start site region 92447
Tssr92448 10 17724259 to 17724276 17 + TSS region transcription start site region 92448
Tssr96813 10 17724307 to 17724352 45 - TSS region transcription start site region 96813
Tssr92449 10 17724308 to 17724341 33 + TSS region transcription start site region 92449
Tssr96814 10 17724353 to 17724366 13 - TSS region transcription start site region 96814
Tssr92450 10 17724643 to 17724678 35 + TSS region transcription start site region 92450
Tssr92451 10 17724683 to 17724695 12 + TSS region transcription start site region 92451
Tssr92452 10 17724774 to 17724810 36 + TSS region transcription start site region 92452
Tssr92453 10 17772734 to 17772741 7 + TSS region transcription start site region 92453
Gm20655 10 17790522 to 17799921 9399 - antisense lncRNA gene predicted gene 20655
Tssr92454 10 17796201 to 17796226 25 + TSS region transcription start site region 92454
Txlnb 10 17796226 to 17845665 49439 + protein coding gene taxilin beta
Tssr92455 10 17796274 to 17796339 65 + TSS region transcription start site region 92455
Tssr96815 10 17799435 to 17799446 11 - TSS region transcription start site region 96815
Tssr92456 10 17802513 to 17802518 5 + TSS region transcription start site region 92456
Gm7584 10 17817379 to 17818315 936 + pseudogene predicted gene 7584
Igan1 10 17842565 to 29828159 11985594 QTL IgA nephropathy 1
D10Mit50 10 17842565 to 17842708 143 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 50
Heca 10 17899040 to 17948067 49027 - protein coding gene hdc homolog, cell cycle regulator
2210037E17Rik 10 17912054 to 17912954 900 unclassified gene RIKEN cDNA 2210037E17 gene
Tssr96816 10 17912445 to 17912448 3 - TSS region transcription start site region 96816