Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:13393139-13963140

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Phactr2 10 13207717 to 13474412 266695 - protein coding gene phosphatase and actin regulator 2
Cpgi1312 10 13420258 to 13420531 273 CpG island CpG island 1312
D10Mit211 10 13427317 to 13427431 114 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 211
Tssr96762 10 13428712 to 13428729 17 - TSS region transcription start site region 96762
Tssr96763 10 13443682 to 13443694 12 - TSS region transcription start site region 96763
Tssr3139 10 13446062 to 13446104 42 - TSS region transcription start site region 3139
Tssr96764 10 13446108 to 13446134 26 - TSS region transcription start site region 96764
Tssr96765 10 13446146 to 13446155 9 - TSS region transcription start site region 96765
Cpgi1313 10 13473472 to 13474773 1301 CpG island CpG island 1313
Tssr96766 10 13474281 to 13474324 43 - TSS region transcription start site region 96766
Tssr96767 10 13474361 to 13474441 80 - TSS region transcription start site region 96767
Tssr96768 10 13474667 to 13474703 36 - TSS region transcription start site region 96768
Tssr92393 10 13499534 to 13499548 14 + TSS region transcription start site region 92393
Fuca2 10 13500569 to 13517275 16706 + protein coding gene fucosidase, alpha-L- 2, plasma
Tssr96769 10 13500908 to 13500947 39 - TSS region transcription start site region 96769
Cpgi1314 10 13501022 to 13501519 497 CpG island CpG island 1314
Tssr92394 10 13501032 to 13501043 11 + TSS region transcription start site region 92394
Tssr92395 10 13501046 to 13501070 24 + TSS region transcription start site region 92395
Tssr92396 10 13501076 to 13501095 19 + TSS region transcription start site region 92396
Tssr92397 10 13501150 to 13501190 40 + TSS region transcription start site region 92397
Tssr92398 10 13502704 to 13502718 14 + TSS region transcription start site region 92398
Pex3 10 13523842 to 13553142 29300 - protein coding gene peroxisomal biogenesis factor 3
Tssr96770 10 13540316 to 13540319 3 - TSS region transcription start site region 96770
Cpgi1315 10 13552851 to 13553485 634 CpG island CpG island 1315
Tssr96771 10 13552855 to 13552870 15 - TSS region transcription start site region 96771
Adat2 10 13552907 to 13563376 10469 + protein coding gene adenosine deaminase, tRNA-specific 2
Tssr96772 10 13552999 to 13553061 62 - TSS region transcription start site region 96772
Tssr96773 10 13553063 to 13553085 22 - TSS region transcription start site region 96773
Tssr96774 10 13553111 to 13553126 15 - TSS region transcription start site region 96774
Tssr96775 10 13553140 to 13553153 13 - TSS region transcription start site region 96775
Tssr96776 10 13553155 to 13553166 11 - TSS region transcription start site region 96776
Tssr92399 10 13553187 to 13553239 52 + TSS region transcription start site region 92399
Tssr92400 10 13553245 to 13553258 13 + TSS region transcription start site region 92400
Gm48773 10 13627198 to 13635107 7909 + lincRNA gene predicted gene, 48773
Aig1 10 13647054 to 13868980 221926 - protein coding gene androgen-induced 1
A730010A20Rik 10 13669955 to 13672214 2259 unclassified gene RIKEN cDNA A730010A20 gene
Tssr164702 10 13678139 to 13678140 1 + TSS region transcription start site region 164702
Tssr96777 10 13678987 to 13679011 24 - TSS region transcription start site region 96777
6430706H07Rik 10 13687205 to 13689806 2601 unclassified gene RIKEN cDNA 6430706H07 gene
Cpgi1316 10 13739998 to 13740173 175 CpG island CpG island 1316
Tssr96778 10 13832621 to 13832659 38 - TSS region transcription start site region 96778
Tssr96779 10 13832678 to 13832707 29 - TSS region transcription start site region 96779
Tssr96780 10 13832735 to 13832748 13 - TSS region transcription start site region 96780
Tssr92401 10 13832794 to 13832800 6 + TSS region transcription start site region 92401
Cpgi1317 10 13868236 to 13869225 989 CpG island CpG island 1317
Tssr3140 10 13868756 to 13868776 20 - TSS region transcription start site region 3140
Tssr96781 10 13868779 to 13868874 95 - TSS region transcription start site region 96781
Tssr96782 10 13868932 to 13869004 72 - TSS region transcription start site region 96782
Tssr96783 10 13869750 to 13869781 31 - TSS region transcription start site region 96783
Gm32172 10 13871280 to 13879208 7928 + lincRNA gene predicted gene, 32172
Gm32105 10 13878048 to 13883265 5217 - lincRNA gene predicted gene, 32105
Gm22995 10 13888537 to 13888643 106 - snRNA gene predicted gene, 22995
Gm8330 10 13890646 to 13891653 1007 - pseudogene predicted gene 8330
4930444K16Rik 10 13927198 to 13928964 1766 - unclassified gene RIKEN cDNA 4930444K16 gene