Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:13118970-13488977

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Plagl1 10 13090788 to 13131694 40906 + protein coding gene pleiomorphic adenoma gene-like 1
Tssr92384 10 13124951 to 13124965 14 + TSS region transcription start site region 92384
Cpgi1309 10 13127202 to 13127522 320 CpG island CpG island 1309
Tssr92385 10 13129017 to 13129051 34 + TSS region transcription start site region 92385
Tssr92386 10 13129575 to 13129584 9 + TSS region transcription start site region 92386
Tssr92387 10 13129825 to 13129856 31 + TSS region transcription start site region 92387
Tssr92388 10 13130023 to 13130059 36 + TSS region transcription start site region 92388
Tssr92389 10 13130316 to 13130337 21 + TSS region transcription start site region 92389
Tssr92390 10 13130593 to 13130639 46 + TSS region transcription start site region 92390
Zc2hc1b 10 13149644 to 13178038 28394 - protein coding gene zinc finger, C2HC-type containing 1B
Tssr96744 10 13177989 to 13178004 15 - TSS region transcription start site region 96744
Ltv1 10 13178597 to 13193137 14540 - protein coding gene LTV1 ribosome biogenesis factor
Tssr96745 10 13182411 to 13182444 33 - TSS region transcription start site region 96745
Cpgi1310 10 13192720 to 13193332 612 CpG island CpG island 1310
Tssr96746 10 13192730 to 13192800 70 - TSS region transcription start site region 96746
Tssr96747 10 13193069 to 13193076 7 - TSS region transcription start site region 96747
Tssr96748 10 13193096 to 13193155 59 - TSS region transcription start site region 96748
Tssr96749 10 13193156 to 13193167 11 - TSS region transcription start site region 96749
Gm47402 10 13205226 to 13205645 419 + pseudogene predicted gene, 47402
Phactr2 10 13207717 to 13474412 266695 - protein coding gene phosphatase and actin regulator 2
Tssr96750 10 13209934 to 13209937 3 - TSS region transcription start site region 96750
Gm46211 10 13224869 to 13227608 2739 + lncRNA gene predicted gene, 46211
Tssr96751 10 13292038 to 13292071 33 - TSS region transcription start site region 96751
Tssr96752 10 13301107 to 13301116 9 - TSS region transcription start site region 96752
Tssr96753 10 13303970 to 13303977 7 - TSS region transcription start site region 96753
Tssr92391 10 13304114 to 13304127 13 + TSS region transcription start site region 92391
Tssr96754 10 13304719 to 13304754 35 - TSS region transcription start site region 96754
Tssr92392 10 13304957 to 13304982 25 + TSS region transcription start site region 92392
Cpgi1311 10 13323827 to 13324499 672 CpG island CpG island 1311
Tssr96755 10 13324221 to 13324242 21 - TSS region transcription start site region 96755
Tssr96756 10 13324250 to 13324318 68 - TSS region transcription start site region 96756
Tssr96757 10 13335505 to 13335514 9 - TSS region transcription start site region 96757
Tssr96758 10 13375058 to 13375075 17 - TSS region transcription start site region 96758
Tssr96759 10 13375358 to 13375374 16 - TSS region transcription start site region 96759
Tssr96760 10 13388755 to 13388774 19 - TSS region transcription start site region 96760
Tssr96761 10 13388830 to 13388845 15 - TSS region transcription start site region 96761
Cpgi1312 10 13420258 to 13420531 273 CpG island CpG island 1312
D10Mit211 10 13427317 to 13427431 114 DNA segment DNA segment, Chr 10, Massachusetts Institute of Technology 211
Tssr96762 10 13428712 to 13428729 17 - TSS region transcription start site region 96762
Tssr96763 10 13443682 to 13443694 12 - TSS region transcription start site region 96763
Tssr3139 10 13446062 to 13446104 42 - TSS region transcription start site region 3139
Tssr96764 10 13446108 to 13446134 26 - TSS region transcription start site region 96764
Tssr96765 10 13446146 to 13446155 9 - TSS region transcription start site region 96765
Cpgi1313 10 13473472 to 13474773 1301 CpG island CpG island 1313
Tssr96766 10 13474281 to 13474324 43 - TSS region transcription start site region 96766
Tssr96767 10 13474361 to 13474441 80 - TSS region transcription start site region 96767
Tssr96768 10 13474667 to 13474703 36 - TSS region transcription start site region 96768