Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:129648152-130900240

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Olfr800 10 129659808 to 129660743 935 + protein coding gene olfactory receptor 800
Tssr3403 10 129664864 to 129664869 5 + TSS region transcription start site region 3403
Smt3h2-ps3 10 129664875 to 129665862 987 + pseudogene SMT3 suppressor of mif two 3 homolog 2, pseudogene 3 (S. cerevisiae)
Olfr801 10 129669561 to 129670517 956 - protein coding gene olfactory receptor 801
Olfr802 10 129681799 to 129686098 4299 - protein coding gene olfactory receptor 802
Olfr803 10 129691113 to 129692039 926 - protein coding gene olfactory receptor 803
Gm24717 10 129695978 to 129696101 123 + snoRNA gene predicted gene, 24717
Olfr804 10 129704880 to 129705824 944 + protein coding gene olfactory receptor 804
Olfr805 10 129722583 to 129729292 6709 - protein coding gene olfactory receptor 805
Gm24485 10 129733232 to 129733298 66 + miRNA gene predicted gene, 24485
Olfr806 10 129737974 to 129738915 941 - protein coding gene olfactory receptor 806
Olfr807 10 129754495 to 129757800 3305 - protein coding gene olfactory receptor 807
Olfr808 10 129765483 to 129768436 2953 + protein coding gene olfactory receptor 808
Olfr809 10 129775871 to 129776857 986 + protein coding gene olfactory receptor 809
Olfr810 10 129790649 to 129791587 938 - protein coding gene olfactory receptor 810
Olfr811 10 129801564 to 129802523 959 - protein coding gene olfactory receptor 811
Olfr812 10 129842026 to 129845997 3971 - protein coding gene olfactory receptor 812
Olfr813 10 129856520 to 129857452 932 + protein coding gene olfactory receptor 813
Olfr814 10 129873823 to 129874755 932 - protein coding gene olfactory receptor 814
Olfr815 10 129901776 to 129902726 950 - protein coding gene olfactory receptor 815
Olfr816 10 129911338 to 129912276 938 - protein coding gene olfactory receptor 816
Olfr1544-ps1 10 129925115 to 129925417 302 - pseudogene olfactory receptor 1544, pseudogene 1
Olfr817-ps1 10 129929543 to 129930481 938 - pseudogene olfactory receptor 817, pseudogene 1
Olfr818 10 129945104 to 129946060 956 - protein coding gene olfactory receptor 818
Olfr819 10 129965736 to 129966698 962 - protein coding gene olfactory receptor 819
Olfr247 10 129974605 to 129975549 944 - protein coding gene olfactory receptor 247
Gm10310 10 129983480 to 129984442 962 - protein coding gene predicted pseudogene 10310
Gm43977 10 129988142 to 129988330 188 - pseudogene predicted gene, 43977
Tssr96487 10 130004356 to 130004361 5 + TSS region transcription start site region 96487
Olfr820 10 130017363 to 130018301 938 + protein coding gene olfactory receptor 820
Olfr821 10 130030390 to 130034560 4170 + protein coding gene olfactory receptor 821
Olfr822 10 130074412 to 130075350 938 + protein coding gene olfactory receptor 822
Olfr1542-ps1 10 130093192 to 130093842 650 - pseudogene olfactory receptor 1542, pseudogene 1
Olfr823 10 130111841 to 130112788 947 - protein coding gene olfactory receptor 823
Gm5181 10 130120239 to 130121209 970 + pseudogene predicted gene 5181
Olfr824 10 130126108 to 130127055 947 - protein coding gene olfactory receptor 824
Gm9560 10 130140042 to 130149974 9932 + pseudogene predicted gene 9560
Olfr825 10 130162362 to 130163324 962 - protein coding gene olfactory receptor 825
Gm48514 10 130163679 to 130163961 282 + pseudogene predicted gene, 48514
Olfr826 10 130179937 to 130184162 4225 - protein coding gene olfactory receptor 826
Olfr827 10 130210160 to 130211128 968 - protein coding gene olfactory receptor 827
Neurod4 10 130268152 to 130280240 12088 - protein coding gene neurogenic differentiation 4
Tssr99987 10 130280218 to 130280242 24 - TSS region transcription start site region 99987
Tssr99988 10 130280252 to 130280263 11 - TSS region transcription start site region 99988
Tespa1 10 130322826 to 130363469 40643 + protein coding gene thymocyte expressed, positive selection associated 1
Tssr96488 10 130322827 to 130322842 15 + TSS region transcription start site region 96488
Tssr96489 10 130322845 to 130322856 11 + TSS region transcription start site region 96489
Tssr96490 10 130322869 to 130322905 36 + TSS region transcription start site region 96490
Tssr96491 10 130322915 to 130322924 9 + TSS region transcription start site region 96491
Tssr96492 10 130330972 to 130330979 7 + TSS region transcription start site region 96492
Tssr96493 10 130330982 to 130331031 49 + TSS region transcription start site region 96493
Tssr96494 10 130332976 to 130332988 12 + TSS region transcription start site region 96494
Tssr96495 10 130354469 to 130354473 4 + TSS region transcription start site region 96495
Tssr96496 10 130361092 to 130361095 3 + TSS region transcription start site region 96496
Tssr96497 10 130363676 to 130363689 13 + TSS region transcription start site region 96497
Tssr96498 10 130368074 to 130368078 4 + TSS region transcription start site region 96498
Tssr96499 10 130379133 to 130379137 4 + TSS region transcription start site region 96499
Vmn2r84 10 130385800 to 130394241 8441 - protein coding gene vomeronasal 2, receptor 84
Gm9770 10 130412499 to 130413309 810 + pseudogene predicted gene 9770
Vmn2r85 10 130418261 to 130429612 11351 - protein coding gene vomeronasal 2, receptor 85
Gm18754 10 130443962 to 130444986 1024 - pseudogene predicted gene, 18754
Cpgi2426 10 130444733 to 130445023 290 CpG island CpG island 2426
Vmn2r86 10 130446199 to 130455894 9695 - protein coding gene vomeronasal 2, receptor 86
Gm18755 10 130469513 to 130470609 1096 - pseudogene predicted gene, 18755
Cpgi2427 10 130470273 to 130470759 486 CpG island CpG island 2427
Vmn2r87 10 130471821 to 130497379 25558 - protein coding gene vomeronasal 2, receptor 87
Gm35405 10 130535562 to 130535961 399 - pseudogene predicted gene, 35405
Tssr99989 10 130541957 to 130541967 10 - TSS region transcription start site region 99989
Cpgi2428 10 130542075 to 130542581 506 CpG island CpG island 2428
Tssr96500 10 130542325 to 130542359 34 + TSS region transcription start site region 96500
Gm31793 10 130542347 to 130571793 29446 + lincRNA gene predicted gene, 31793
Tssr96501 10 130544775 to 130544780 5 + TSS region transcription start site region 96501
Gm23793 10 130557348 to 130557464 116 - snRNA gene predicted gene, 23793
Gm26445 10 130592136 to 130592244 108 - miRNA gene predicted gene, 26445
Ftl1-ps2 10 130592157 to 130592705 548 - pseudogene ferritin light polypeptide, pseudogene 2
Tssr3404 10 130592909 to 130592911 2 - TSS region transcription start site region 3404