Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:129574412-130575350

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Frct3 10 122950065 to 129631127 6681062 QTL fear conditioning traits 3
Frct3a 10 122950065 to 129631127 6681062 QTL fear conditioning traits 3a
Frct3c 10 122950065 to 129631127 6681062 QTL fear conditioning traits 3c
Opfaq10 10 125797802 to 129630506 3832704 QTL open field activity QTL 10
Frct3b 10 127839705 to 129631127 1791422 QTL fear conditioning traits 3b
Frct3d 10 127839705 to 129631127 1791422 QTL fear conditioning traits 3d
Opfaq7 10 127910449 to 129630506 1720057 QTL open field activity QTL 7
Olfr795-ps1 10 129578680 to 129579442 762 + pseudogene olfactory receptor 795, pseudogene 1
Gm23252 10 129582786 to 129582895 109 - miRNA gene predicted gene, 23252
Olfr796 10 129607547 to 129608479 932 - protein coding gene olfactory receptor 796
Olfr797-ps1 10 129622198 to 129622612 414 - pseudogene olfactory receptor 797, pseudogene 1
Olfr798 10 129625124 to 129627886 2762 - protein coding gene olfactory receptor 798
Olfr799 10 129647130 to 129648065 935 + protein coding gene olfactory receptor 799
Olfr800 10 129659808 to 129660743 935 + protein coding gene olfactory receptor 800
Tssr3403 10 129664864 to 129664869 5 + TSS region transcription start site region 3403
Smt3h2-ps3 10 129664875 to 129665862 987 + pseudogene SMT3 suppressor of mif two 3 homolog 2, pseudogene 3 (S. cerevisiae)
Olfr801 10 129669561 to 129670517 956 - protein coding gene olfactory receptor 801
Olfr802 10 129681799 to 129686098 4299 - protein coding gene olfactory receptor 802
Olfr803 10 129691113 to 129692039 926 - protein coding gene olfactory receptor 803
Gm24717 10 129695978 to 129696101 123 + snoRNA gene predicted gene, 24717
Olfr804 10 129704880 to 129705824 944 + protein coding gene olfactory receptor 804
Olfr805 10 129722583 to 129729292 6709 - protein coding gene olfactory receptor 805
Gm24485 10 129733232 to 129733298 66 + miRNA gene predicted gene, 24485
Olfr806 10 129737974 to 129738915 941 - protein coding gene olfactory receptor 806
Olfr807 10 129754495 to 129757800 3305 - protein coding gene olfactory receptor 807
Olfr808 10 129765483 to 129768436 2953 + protein coding gene olfactory receptor 808
Olfr809 10 129775871 to 129776857 986 + protein coding gene olfactory receptor 809
Olfr810 10 129790649 to 129791587 938 - protein coding gene olfactory receptor 810
Olfr811 10 129801564 to 129802523 959 - protein coding gene olfactory receptor 811
Olfr812 10 129842026 to 129845997 3971 - protein coding gene olfactory receptor 812
Olfr813 10 129856520 to 129857452 932 + protein coding gene olfactory receptor 813
Olfr814 10 129873823 to 129874755 932 - protein coding gene olfactory receptor 814
Olfr815 10 129901776 to 129902726 950 - protein coding gene olfactory receptor 815
Olfr816 10 129911338 to 129912276 938 - protein coding gene olfactory receptor 816
Olfr1544-ps1 10 129925115 to 129925417 302 - pseudogene olfactory receptor 1544, pseudogene 1
Olfr817-ps1 10 129929543 to 129930481 938 - pseudogene olfactory receptor 817, pseudogene 1
Olfr818 10 129945104 to 129946060 956 - protein coding gene olfactory receptor 818
Olfr819 10 129965736 to 129966698 962 - protein coding gene olfactory receptor 819
Olfr247 10 129974605 to 129975549 944 - protein coding gene olfactory receptor 247
Gm10310 10 129983480 to 129984442 962 - protein coding gene predicted pseudogene 10310
Gm43977 10 129988142 to 129988330 188 - pseudogene predicted gene, 43977
Tssr96487 10 130004356 to 130004361 5 + TSS region transcription start site region 96487
Olfr820 10 130017363 to 130018301 938 + protein coding gene olfactory receptor 820
Olfr821 10 130030390 to 130034560 4170 + protein coding gene olfactory receptor 821
Olfr822 10 130074412 to 130075350 938 + protein coding gene olfactory receptor 822
Olfr1542-ps1 10 130093192 to 130093842 650 - pseudogene olfactory receptor 1542, pseudogene 1
Olfr823 10 130111841 to 130112788 947 - protein coding gene olfactory receptor 823
Gm5181 10 130120239 to 130121209 970 + pseudogene predicted gene 5181
Olfr824 10 130126108 to 130127055 947 - protein coding gene olfactory receptor 824
Gm9560 10 130140042 to 130149974 9932 + pseudogene predicted gene 9560
Olfr825 10 130162362 to 130163324 962 - protein coding gene olfactory receptor 825
Gm48514 10 130163679 to 130163961 282 + pseudogene predicted gene, 48514
Olfr826 10 130179937 to 130184162 4225 - protein coding gene olfactory receptor 826
Olfr827 10 130210160 to 130211128 968 - protein coding gene olfactory receptor 827
Neurod4 10 130268152 to 130280240 12088 - protein coding gene neurogenic differentiation 4
Tssr99987 10 130280218 to 130280242 24 - TSS region transcription start site region 99987
Tssr99988 10 130280252 to 130280263 11 - TSS region transcription start site region 99988
Tespa1 10 130322826 to 130363469 40643 + protein coding gene thymocyte expressed, positive selection associated 1
Tssr96488 10 130322827 to 130322842 15 + TSS region transcription start site region 96488
Tssr96489 10 130322845 to 130322856 11 + TSS region transcription start site region 96489
Tssr96490 10 130322869 to 130322905 36 + TSS region transcription start site region 96490
Tssr96491 10 130322915 to 130322924 9 + TSS region transcription start site region 96491
Tssr96492 10 130330972 to 130330979 7 + TSS region transcription start site region 96492
Tssr96493 10 130330982 to 130331031 49 + TSS region transcription start site region 96493
Tssr96494 10 130332976 to 130332988 12 + TSS region transcription start site region 96494
Tssr96495 10 130354469 to 130354473 4 + TSS region transcription start site region 96495
Tssr96496 10 130361092 to 130361095 3 + TSS region transcription start site region 96496
Tssr96497 10 130363676 to 130363689 13 + TSS region transcription start site region 96497
Tssr96498 10 130368074 to 130368078 4 + TSS region transcription start site region 96498
Tssr96499 10 130379133 to 130379137 4 + TSS region transcription start site region 96499
Vmn2r84 10 130385800 to 130394241 8441 - protein coding gene vomeronasal 2, receptor 84
Gm9770 10 130412499 to 130413309 810 + pseudogene predicted gene 9770
Vmn2r85 10 130418261 to 130429612 11351 - protein coding gene vomeronasal 2, receptor 85
Gm18754 10 130443962 to 130444986 1024 - pseudogene predicted gene, 18754
Cpgi2426 10 130444733 to 130445023 290 CpG island CpG island 2426
Vmn2r86 10 130446199 to 130455894 9695 - protein coding gene vomeronasal 2, receptor 86
Gm18755 10 130469513 to 130470609 1096 - pseudogene predicted gene, 18755
Cpgi2427 10 130470273 to 130470759 486 CpG island CpG island 2427
Vmn2r87 10 130471821 to 130497379 25558 - protein coding gene vomeronasal 2, receptor 87
Gm35405 10 130535562 to 130535961 399 - pseudogene predicted gene, 35405
Tssr99989 10 130541957 to 130541967 10 - TSS region transcription start site region 99989
Cpgi2428 10 130542075 to 130542581 506 CpG island CpG island 2428
Tssr96500 10 130542325 to 130542359 34 + TSS region transcription start site region 96500
Gm31793 10 130542347 to 130571793 29446 + lincRNA gene predicted gene, 31793
Tssr96501 10 130544775 to 130544780 5 + TSS region transcription start site region 96501
Gm23793 10 130557348 to 130557464 116 - snRNA gene predicted gene, 23793