Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:128900536-129601474

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89 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr96468 10 128900964 to 128900975 11 + TSS region transcription start site region 96468
Tssr96469 10 128908907 to 128908925 18 + TSS region transcription start site region 96469
Cd63 10 128908919 to 128912822 3903 + protein coding gene CD63 antigen
Tssr96470 10 128908966 to 128908978 12 + TSS region transcription start site region 96470
Tssr96471 10 128908996 to 128909027 31 + TSS region transcription start site region 96471
Tssr96472 10 128909404 to 128909429 25 + TSS region transcription start site region 96472
Tssr96473 10 128909430 to 128909443 13 + TSS region transcription start site region 96473
Cpgi2423 10 128909433 to 128910858 1425 CpG island CpG island 2423
Tssr96474 10 128909629 to 128909636 7 + TSS region transcription start site region 96474
Tssr96475 10 128909869 to 128909873 4 + TSS region transcription start site region 96475
Tssr96476 10 128909895 to 128909930 35 + TSS region transcription start site region 96476
Tssr96477 10 128911473 to 128911518 45 + TSS region transcription start site region 96477
Tssr96478 10 128911569 to 128911598 29 + TSS region transcription start site region 96478
Rdh5 10 128913588 to 128919297 5709 - protein coding gene retinol dehydrogenase 5
Tssr99971 10 128919173 to 128919184 11 - TSS region transcription start site region 99971
Tssr99972 10 128919190 to 128919227 37 - TSS region transcription start site region 99972
Bloc1s1 10 128919220 to 128923550 4330 - protein coding gene biogenesis of lysosomal organelles complex-1, subunit 1
Tssr99973 10 128919248 to 128919253 5 - TSS region transcription start site region 99973
Tssr99974 10 128919259 to 128919305 46 - TSS region transcription start site region 99974
Tssr96479 10 128922583 to 128922597 14 + TSS region transcription start site region 96479
Tssr99975 10 128922978 to 128923069 91 - TSS region transcription start site region 99975
Cpgi2424 10 128922989 to 128923705 716 CpG island CpG island 2424
Tssr99976 10 128923439 to 128923545 106 - TSS region transcription start site region 99976
Tssr99977 10 128923948 to 128923957 9 - TSS region transcription start site region 99977
Cpgi2425 10 128933751 to 128934264 513 CpG island CpG island 2425
Tssr96480 10 128933751 to 128933763 12 + TSS region transcription start site region 96480
Tssr96481 10 128933776 to 128933781 5 + TSS region transcription start site region 96481
Tssr96482 10 128933782 to 128933828 46 + TSS region transcription start site region 96482
Itga7 10 128933818 to 128958282 24464 + protein coding gene integrin alpha 7
Gm46186 10 128935998 to 128949026 13028 - lncRNA gene predicted gene, 46186
Tssr96483 10 128940683 to 128940694 11 + TSS region transcription start site region 96483
Gm25494 10 128944905 to 128945004 99 + snRNA gene predicted gene, 25494
D10Mit269 10 128954267 to 128954362 95 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 269
Mettl7b 10 128958277 to 128960988 2711 - protein coding gene methyltransferase like 7B
Tssr99978 10 128958805 to 128958816 11 - TSS region transcription start site region 99978
Tssr99979 10 128958945 to 128958954 9 - TSS region transcription start site region 99979
D10Utsw1 10 128959290 to 128959450 160 DNA segment DNA segment, Chr 10, University of Texas Southwestern 1
Tssr99980 10 128960612 to 128960639 27 - TSS region transcription start site region 99980
Tssr99981 10 128960671 to 128960695 24 - TSS region transcription start site region 99981
Tssr99982 10 128960825 to 128960853 28 - TSS region transcription start site region 99982
Tssr99983 10 128960948 to 128960959 11 - TSS region transcription start site region 99983
Tssr99984 10 128960965 to 128960982 17 - TSS region transcription start site region 99984
Tssr3402 10 128961012 to 128961013 1 - TSS region transcription start site region 3402
Tssr96484 10 128971077 to 128971086 9 + TSS region transcription start site region 96484
Tssr96485 10 128971191 to 128971202 11 + TSS region transcription start site region 96485
9030616G12Rik 10 128971197 to 128978115 6918 + lincRNA gene RIKEN cDNA 9030616G12 gene
Tssr96486 10 128971216 to 128971229 13 + TSS region transcription start site region 96486
Tssr99985 10 128980939 to 128980952 13 - TSS region transcription start site region 99985
Olfr9 10 128989914 to 128990852 938 + protein coding gene olfactory receptor 9
Tssr99986 10 128999345 to 128999351 6 - TSS region transcription start site region 99986
Olfr763 10 129011287 to 129012216 929 + protein coding gene olfactory receptor 763
Olfr764-ps1 10 129033860 to 129034798 938 - pseudogene olfactory receptor 764, pseudogene 1
Olfr765 10 129046132 to 129047061 929 - protein coding gene olfactory receptor 765
Olfr766-ps1 10 129063028 to 129063966 938 - pseudogene olfactory receptor 766, pseudogene 1
Olfr767 10 129079032 to 129079961 929 - protein coding gene olfactory receptor 767
Olfr768 10 129093034 to 129093972 938 - protein coding gene olfactory receptor 768
Olfr769 10 129111485 to 129112423 938 - protein coding gene olfactory receptor 769
Olfr770 10 129132831 to 129138794 5963 - protein coding gene olfactory receptor 770
Olfr771 10 129160029 to 129160982 953 - protein coding gene olfactory receptor 771
Gm25807 10 129172573 to 129172877 304 - unclassified non-coding RNA gene predicted gene, 25807
Olfr772 10 129174051 to 129175054 1003 - protein coding gene olfactory receptor 772
Olfr773 10 129186484 to 129187419 935 - protein coding gene olfactory receptor 773
Gm6538 10 129228727 to 129229922 1195 - pseudogene predicted gene 6538
Gm18803 10 129231532 to 129233291 1759 - pseudogene predicted gene, 18803
Olfr774 10 129238151 to 129239089 938 + protein coding gene olfactory receptor 774
Olfr775 10 129250536 to 129251474 938 + protein coding gene olfactory receptor 775
Olfr776 10 129260963 to 129261901 938 + protein coding gene olfactory receptor 776
Olfr777 10 129268386 to 129270550 2164 - protein coding gene olfactory receptor 777
Olfr778-ps1 10 129288793 to 129288999 206 - pseudogene olfactory receptor 778, pseudogene 1
Gm25764 10 129302091 to 129302224 133 + snoRNA gene predicted gene, 25764
Olfr779 10 129311180 to 129312108 928 + polymorphic pseudogene olfactory receptor 779
Olfr780 10 129321625 to 129322563 938 + protein coding gene olfactory receptor 780
Olfr781 10 129332883 to 129333818 935 + protein coding gene olfactory receptor 781
Olfr782 10 129350565 to 129351509 944 + protein coding gene olfactory receptor 782
Olfr783-ps1 10 129376961 to 129377401 440 + pseudogene olfactory receptor 783, pseudogene 1
Olfr784 10 129387635 to 129388822 1187 + protein coding gene olfactory receptor 784
Olfr785 10 129409368 to 129410306 938 + protein coding gene olfactory receptor 785
Olfr786 10 129436814 to 129437752 938 + protein coding gene olfactory receptor 786
Olfr787 10 129461940 to 129463616 1676 + protein coding gene olfactory receptor 787
Gm18121 10 129465979 to 129466517 538 + pseudogene predicted gene, 18121
Olfr788 10 129472694 to 129473629 935 + protein coding gene olfactory receptor 788
Olfr789 10 129487012 to 129487950 938 + protein coding gene olfactory receptor 789
Olfr790 10 129500886 to 129501854 968 + protein coding gene olfactory receptor 790
Olfr791 10 129526229 to 129527167 938 + protein coding gene olfactory receptor 791
Olfr792 10 129540539 to 129541474 935 + protein coding gene olfactory receptor 792
Olfr793-ps1 10 129547660 to 129548554 894 + pseudogene olfactory receptor 793, pseudogene 1
Olfr794 10 129567662 to 129571619 3957 + protein coding gene olfactory receptor 794
Olfr795-ps1 10 129578680 to 129579442 762 + pseudogene olfactory receptor 795, pseudogene 1
Gm23252 10 129582786 to 129582895 109 - miRNA gene predicted gene, 23252