Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:128843151-129634089

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110 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Frct3 10 122950065 to 129631127 6681062 QTL fear conditioning traits 3
Frct3c 10 122950065 to 129631127 6681062 QTL fear conditioning traits 3c
Frct3a 10 122950065 to 129631127 6681062 QTL fear conditioning traits 3a
Opfaq10 10 125797802 to 129630506 3832704 QTL open field activity QTL 10
Frct3b 10 127839705 to 129631127 1791422 QTL fear conditioning traits 3b
Frct3d 10 127839705 to 129631127 1791422 QTL fear conditioning traits 3d
Opfaq7 10 127910449 to 129630506 1720057 QTL open field activity QTL 7
Sarnp 10 128819650 to 128877638 57988 + protein coding gene SAP domain containing ribonucleoprotein
Tssr96463 10 128861425 to 128861475 50 + TSS region transcription start site region 96463
Tssr96464 10 128861970 to 128861993 23 + TSS region transcription start site region 96464
Tssr99968 10 128882976 to 128882980 4 - TSS region transcription start site region 99968
Gdf11 10 128884546 to 128891718 7172 - protein coding gene growth differentiation factor 11
Cpgi2422 10 128890713 to 128892378 1665 CpG island CpG island 2422
Tssr99969 10 128891674 to 128891715 41 - TSS region transcription start site region 99969
Tssr99970 10 128891863 to 128891878 15 - TSS region transcription start site region 99970
Tssr96465 10 128896235 to 128896246 11 + TSS region transcription start site region 96465
Tssr96466 10 128896247 to 128896258 11 + TSS region transcription start site region 96466
Tssr96467 10 128900329 to 128900361 32 + TSS region transcription start site region 96467
Tssr96468 10 128900964 to 128900975 11 + TSS region transcription start site region 96468
Tssr96469 10 128908907 to 128908925 18 + TSS region transcription start site region 96469
Cd63 10 128908919 to 128912822 3903 + protein coding gene CD63 antigen
Tssr96470 10 128908966 to 128908978 12 + TSS region transcription start site region 96470
Tssr96471 10 128908996 to 128909027 31 + TSS region transcription start site region 96471
Tssr96472 10 128909404 to 128909429 25 + TSS region transcription start site region 96472
Tssr96473 10 128909430 to 128909443 13 + TSS region transcription start site region 96473
Cpgi2423 10 128909433 to 128910858 1425 CpG island CpG island 2423
Tssr96474 10 128909629 to 128909636 7 + TSS region transcription start site region 96474
Tssr96475 10 128909869 to 128909873 4 + TSS region transcription start site region 96475
Tssr96476 10 128909895 to 128909930 35 + TSS region transcription start site region 96476
Tssr96477 10 128911473 to 128911518 45 + TSS region transcription start site region 96477
Tssr96478 10 128911569 to 128911598 29 + TSS region transcription start site region 96478
Rdh5 10 128913588 to 128919297 5709 - protein coding gene retinol dehydrogenase 5
Tssr99971 10 128919173 to 128919184 11 - TSS region transcription start site region 99971
Tssr99972 10 128919190 to 128919227 37 - TSS region transcription start site region 99972
Bloc1s1 10 128919220 to 128923550 4330 - protein coding gene biogenesis of lysosomal organelles complex-1, subunit 1
Tssr99973 10 128919248 to 128919253 5 - TSS region transcription start site region 99973
Tssr99974 10 128919259 to 128919305 46 - TSS region transcription start site region 99974
Tssr96479 10 128922583 to 128922597 14 + TSS region transcription start site region 96479
Tssr99975 10 128922978 to 128923069 91 - TSS region transcription start site region 99975
Cpgi2424 10 128922989 to 128923705 716 CpG island CpG island 2424
Tssr99976 10 128923439 to 128923545 106 - TSS region transcription start site region 99976
Tssr99977 10 128923948 to 128923957 9 - TSS region transcription start site region 99977
Cpgi2425 10 128933751 to 128934264 513 CpG island CpG island 2425
Tssr96480 10 128933751 to 128933763 12 + TSS region transcription start site region 96480
Tssr96481 10 128933776 to 128933781 5 + TSS region transcription start site region 96481
Tssr96482 10 128933782 to 128933828 46 + TSS region transcription start site region 96482
Itga7 10 128933818 to 128958282 24464 + protein coding gene integrin alpha 7
Gm46186 10 128935998 to 128949026 13028 - lncRNA gene predicted gene, 46186
Tssr96483 10 128940683 to 128940694 11 + TSS region transcription start site region 96483
Gm25494 10 128944905 to 128945004 99 + snRNA gene predicted gene, 25494
D10Mit269 10 128954267 to 128954362 95 DNA segment DNA Segment, Chr 10, Massachusetts Institute of Technology 269
Mettl7b 10 128958277 to 128960988 2711 - protein coding gene methyltransferase like 7B
Tssr99978 10 128958805 to 128958816 11 - TSS region transcription start site region 99978
Tssr99979 10 128958945 to 128958954 9 - TSS region transcription start site region 99979
D10Utsw1 10 128959290 to 128959450 160 DNA segment DNA segment, Chr 10, University of Texas Southwestern 1
Tssr99980 10 128960612 to 128960639 27 - TSS region transcription start site region 99980
Tssr99981 10 128960671 to 128960695 24 - TSS region transcription start site region 99981
Tssr99982 10 128960825 to 128960853 28 - TSS region transcription start site region 99982
Tssr99983 10 128960948 to 128960959 11 - TSS region transcription start site region 99983
Tssr99984 10 128960965 to 128960982 17 - TSS region transcription start site region 99984
Tssr3402 10 128961012 to 128961013 1 - TSS region transcription start site region 3402
Tssr96484 10 128971077 to 128971086 9 + TSS region transcription start site region 96484
Tssr96485 10 128971191 to 128971202 11 + TSS region transcription start site region 96485
9030616G12Rik 10 128971197 to 128978115 6918 + lincRNA gene RIKEN cDNA 9030616G12 gene
Tssr96486 10 128971216 to 128971229 13 + TSS region transcription start site region 96486
Tssr99985 10 128980939 to 128980952 13 - TSS region transcription start site region 99985
Olfr9 10 128989914 to 128990852 938 + protein coding gene olfactory receptor 9
Tssr99986 10 128999345 to 128999351 6 - TSS region transcription start site region 99986
Olfr763 10 129011287 to 129012216 929 + protein coding gene olfactory receptor 763
Olfr764-ps1 10 129033860 to 129034798 938 - pseudogene olfactory receptor 764, pseudogene 1
Olfr765 10 129046132 to 129047061 929 - protein coding gene olfactory receptor 765
Olfr766-ps1 10 129063028 to 129063966 938 - pseudogene olfactory receptor 766, pseudogene 1
Olfr767 10 129079032 to 129079961 929 - protein coding gene olfactory receptor 767
Olfr768 10 129093034 to 129093972 938 - protein coding gene olfactory receptor 768
Olfr769 10 129111485 to 129112423 938 - protein coding gene olfactory receptor 769
Olfr770 10 129132831 to 129138794 5963 - protein coding gene olfactory receptor 770
Olfr771 10 129160029 to 129160982 953 - protein coding gene olfactory receptor 771
Gm25807 10 129172573 to 129172877 304 - unclassified non-coding RNA gene predicted gene, 25807
Olfr772 10 129174051 to 129175054 1003 - protein coding gene olfactory receptor 772
Olfr773 10 129186484 to 129187419 935 - protein coding gene olfactory receptor 773
Gm6538 10 129228727 to 129229922 1195 - pseudogene predicted gene 6538
Gm18803 10 129231532 to 129233291 1759 - pseudogene predicted gene, 18803
Olfr774 10 129238151 to 129239089 938 + protein coding gene olfactory receptor 774
Olfr775 10 129250536 to 129251474 938 + protein coding gene olfactory receptor 775
Olfr776 10 129260963 to 129261901 938 + protein coding gene olfactory receptor 776
Olfr777 10 129268386 to 129270550 2164 - protein coding gene olfactory receptor 777
Olfr778-ps1 10 129288793 to 129288999 206 - pseudogene olfactory receptor 778, pseudogene 1
Gm25764 10 129302091 to 129302224 133 + snoRNA gene predicted gene, 25764
Olfr779 10 129311180 to 129312108 928 + polymorphic pseudogene olfactory receptor 779
Olfr780 10 129321625 to 129322563 938 + protein coding gene olfactory receptor 780
Olfr781 10 129332883 to 129333818 935 + protein coding gene olfactory receptor 781
Olfr782 10 129350565 to 129351509 944 + protein coding gene olfactory receptor 782
Olfr783-ps1 10 129376961 to 129377401 440 + pseudogene olfactory receptor 783, pseudogene 1
Olfr784 10 129387635 to 129388822 1187 + protein coding gene olfactory receptor 784
Olfr785 10 129409368 to 129410306 938 + protein coding gene olfactory receptor 785
Olfr786 10 129436814 to 129437752 938 + protein coding gene olfactory receptor 786
Olfr787 10 129461940 to 129463616 1676 + protein coding gene olfactory receptor 787
Gm18121 10 129465979 to 129466517 538 + pseudogene predicted gene, 18121
Olfr788 10 129472694 to 129473629 935 + protein coding gene olfactory receptor 788
Olfr789 10 129487012 to 129487950 938 + protein coding gene olfactory receptor 789
Olfr790 10 129500886 to 129501854 968 + protein coding gene olfactory receptor 790
Olfr791 10 129526229 to 129527167 938 + protein coding gene olfactory receptor 791
Olfr792 10 129540539 to 129541474 935 + protein coding gene olfactory receptor 792
Olfr793-ps1 10 129547660 to 129548554 894 + pseudogene olfactory receptor 793, pseudogene 1
Olfr794 10 129567662 to 129571619 3957 + protein coding gene olfactory receptor 794
Olfr795-ps1 10 129578680 to 129579442 762 + pseudogene olfactory receptor 795, pseudogene 1
Gm23252 10 129582786 to 129582895 109 - miRNA gene predicted gene, 23252
Olfr796 10 129607547 to 129608479 932 - protein coding gene olfactory receptor 796
Olfr797-ps1 10 129622198 to 129622612 414 - pseudogene olfactory receptor 797, pseudogene 1
Olfr798 10 129625124 to 129627886 2762 - protein coding gene olfactory receptor 798