Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:128575401-128656039

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Erbb3 10 128569368 to 128589501 20133 - protein coding gene erb-b2 receptor tyrosine kinase 3
Tssr99899 10 128578469 to 128578505 36 - TSS region transcription start site region 99899
Tssr99900 10 128583757 to 128583800 43 - TSS region transcription start site region 99900
Mir6917 10 128584437 to 128584497 60 - miRNA gene microRNA 6917
Cpgi2410 10 128589197 to 128590669 1472 CpG island CpG island 2410
Tssr99901 10 128589622 to 128589642 20 - TSS region transcription start site region 99901
Tssr99902 10 128589650 to 128589673 23 - TSS region transcription start site region 99902
Tssr99903 10 128589679 to 128589694 15 - TSS region transcription start site region 99903
Tssr99904 10 128589925 to 128589946 21 - TSS region transcription start site region 99904
Gm47540 10 128595615 to 128598623 3008 + lincRNA gene predicted gene, 47540
Gm9182 10 128615401 to 128616039 638 + pseudogene predicted gene 9182
Rps26 10 128624529 to 128626506 1977 - protein coding gene ribosomal protein S26
Cpgi2411 10 128625998 to 128626571 573 CpG island CpG island 2411
Tssr99905 10 128626421 to 128626443 22 - TSS region transcription start site region 99905
Tssr99906 10 128626453 to 128626458 5 - TSS region transcription start site region 99906
Tssr99907 10 128626464 to 128626520 56 - TSS region transcription start site region 99907
Tssr99908 10 128626532 to 128626537 5 - TSS region transcription start site region 99908
Tssr99909 10 128626554 to 128626556 2 - TSS region transcription start site region 99909
Tssr99910 10 128626672 to 128626689 17 - TSS region transcription start site region 99910
Tssr99911 10 128626696 to 128626715 19 - TSS region transcription start site region 99911
Tssr99912 10 128626723 to 128626740 17 - TSS region transcription start site region 99912
Tssr99913 10 128626751 to 128626767 16 - TSS region transcription start site region 99913
Ikzf4 10 128630843 to 128645991 15148 - protein coding gene IKAROS family zinc finger 4
Tssr96435 10 128637393 to 128637420 27 + TSS region transcription start site region 96435
Tssr99914 10 128642928 to 128642941 13 - TSS region transcription start site region 99914
Cpgi2412 10 128645672 to 128646194 522 CpG island CpG island 2412
Tssr99915 10 128645784 to 128645816 32 - TSS region transcription start site region 99915
Gm26876 10 128645840 to 128647800 1960 + lincRNA gene predicted gene, 26876
Tssr99916 10 128645965 to 128645988 23 - TSS region transcription start site region 99916
Gm49782 10 128651259 to 128669315 18056 - lincRNA gene predicted gene, 49782