MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 10:128434734-128484763

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rnf41	10	128411657 to 128441441	29784	+	protein coding gene	ring finger protein 41
Gm26347	10	128435914 to 128436044	130	+	snoRNA gene	predicted gene, 26347
Tssr3398	10	128439149 to 128439162	13	+	TSS region	transcription start site region 3398
Tssr99872	10	128455570 to 128455574	4	-	TSS region	transcription start site region 99872
Cpgi2400	10	128458390 to 128460065	1675		CpG island	CpG island 2400
n-TScga2	10	128458464 to 128458545	81	-	tRNA gene	nuclear encoded tRNA serine 2 (anticodon CGA)
Mir8105	10	128458680 to 128458768	88	+	miRNA gene	microRNA 8105
Tssr96417	10	128458968 to 128458989	21	+	TSS region	transcription start site region 96417
Tssr96418	10	128459209 to 128459220	11	+	TSS region	transcription start site region 96418
Tssr96419	10	128459239 to 128459248	9	+	TSS region	transcription start site region 96419
Smarcc2	10	128459248 to 128490482	31234	+	protein coding gene	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
Tssr96420	10	128459259 to 128459277	18	+	TSS region	transcription start site region 96420
Tssr96421	10	128459290 to 128459328	38	+	TSS region	transcription start site region 96421
Tssr96422	10	128459568 to 128459609	41	+	TSS region	transcription start site region 96422
Tssr96423	10	128459734 to 128459763	29	+	TSS region	transcription start site region 96423
Tssr96424	10	128469278 to 128469288	10	+	TSS region	transcription start site region 96424
Tssr96425	10	128474566 to 128474577	11	+	TSS region	transcription start site region 96425