Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:128371858-128431880

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr96408 10 128376467 to 128376513 46 + TSS region transcription start site region 96408
Cpgi2396 10 128376657 to 128377844 1187 CpG island CpG island 2396
Tssr96409 10 128377086 to 128377155 69 + TSS region transcription start site region 96409
Ankrd52 10 128377124 to 128394006 16882 + protein coding gene ankyrin repeat domain 52
Gm26308 10 128377831 to 128377899 68 - miRNA gene predicted gene, 26308
Mir6914 10 128382838 to 128382906 68 + miRNA gene microRNA 6914
Mir6915 10 128388832 to 128388900 68 + miRNA gene microRNA 6915
Cpgi2397 10 128389257 to 128389412 155 CpG island CpG island 2397
Tssr96410 10 128391264 to 128391266 2 + TSS region transcription start site region 96410
Gm17201 10 128391842 to 128395563 3721 - antisense lncRNA gene predicted gene 17201
Slc39a5 10 128395931 to 128401229 5298 - protein coding gene solute carrier family 39 (metal ion transporter), member 5
Tssr99859 10 128400294 to 128400308 14 - TSS region transcription start site region 99859
Tssr99860 10 128400448 to 128400473 25 - TSS region transcription start site region 99860
Tssr99861 10 128400497 to 128400537 40 - TSS region transcription start site region 99861
Tssr99862 10 128401192 to 128401214 22 - TSS region transcription start site region 99862
Tssr99863 10 128401218 to 128401234 16 - TSS region transcription start site region 99863
Tssr99864 10 128401239 to 128401252 13 - TSS region transcription start site region 99864
Nabp2 10 128401394 to 128411487 10093 - protein coding gene nucleic acid binding protein 2
Tssr99865 10 128401831 to 128401853 22 - TSS region transcription start site region 99865
Tssr99866 10 128401858 to 128401880 22 - TSS region transcription start site region 99866
Gm25361 10 128402758 to 128402833 75 + miRNA gene predicted gene, 25361
Cpgi2398 10 128408936 to 128409970 1034 CpG island CpG island 2398
Tssr99867 10 128409146 to 128409176 30 - TSS region transcription start site region 99867
Tssr99868 10 128409178 to 128409191 13 - TSS region transcription start site region 99868
Tssr99869 10 128409319 to 128409374 55 - TSS region transcription start site region 99869
Tssr99870 10 128409766 to 128409862 96 - TSS region transcription start site region 99870
Tssr99871 10 128410532 to 128410565 33 - TSS region transcription start site region 99871
Cpgi2399 10 128411188 to 128412392 1204 CpG island CpG island 2399
Tssr96411 10 128411623 to 128411676 53 + TSS region transcription start site region 96411
Rnf41 10 128411657 to 128441441 29784 + protein coding gene ring finger protein 41
Tssr96412 10 128411680 to 128411720 40 + TSS region transcription start site region 96412
Tssr96413 10 128411730 to 128411757 27 + TSS region transcription start site region 96413
Tssr96414 10 128413210 to 128413221 11 + TSS region transcription start site region 96414
Tssr96415 10 128415179 to 128415196 17 + TSS region transcription start site region 96415
Tssr96416 10 128428247 to 128428252 5 + TSS region transcription start site region 96416