Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 10:128246140-128348084

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54 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Timeless 10 128232065 to 128252941 20876 + protein coding gene timeless circadian clock 1
Tssr96370 10 128247266 to 128247332 66 + TSS region transcription start site region 96370
Apon 10 128254131 to 128255901 1770 + protein coding gene apolipoprotein N
Tssr96371 10 128254157 to 128254176 19 + TSS region transcription start site region 96371
Tssr96372 10 128254185 to 128254196 11 + TSS region transcription start site region 96372
Tssr96373 10 128255282 to 128255292 10 + TSS region transcription start site region 96373
Apof 10 128267997 to 128270153 2156 + protein coding gene apolipoprotein F
Tssr96374 10 128268624 to 128268639 15 + TSS region transcription start site region 96374
Tssr96375 10 128268646 to 128268651 5 + TSS region transcription start site region 96375
Tssr96376 10 128268656 to 128268722 66 + TSS region transcription start site region 96376
Tssr96377 10 128268850 to 128268869 19 + TSS region transcription start site region 96377
Tssr96378 10 128269173 to 128269194 21 + TSS region transcription start site region 96378
Tssr96379 10 128269201 to 128269213 12 + TSS region transcription start site region 96379
Tssr96380 10 128269326 to 128269341 15 + TSS region transcription start site region 96380
Cpgi2390 10 128270335 to 128270887 552 CpG island CpG island 2390
Tssr96381 10 128270506 to 128270541 35 + TSS region transcription start site region 96381
Tssr96382 10 128270546 to 128270577 31 + TSS region transcription start site region 96382
Stat2 10 128270559 to 128292849 22290 + protein coding gene signal transducer and activator of transcription 2
Tssr96383 10 128271934 to 128271942 8 + TSS region transcription start site region 96383
Tssr96384 10 128277375 to 128277401 26 + TSS region transcription start site region 96384
Tssr96385 10 128277639 to 128277658 19 + TSS region transcription start site region 96385
Tssr96386 10 128278771 to 128278788 17 + TSS region transcription start site region 96386
Cpgi2391 10 128283305 to 128283687 382 CpG island CpG island 2391
Tssr96387 10 128285046 to 128285050 4 + TSS region transcription start site region 96387
Tssr96388 10 128292491 to 128292499 8 + TSS region transcription start site region 96388
Il23a 10 128296140 to 128298084 1944 - protein coding gene interleukin 23, alpha subunit p19
Tssr99851 10 128298066 to 128298101 35 - TSS region transcription start site region 99851
Tssr96389 10 128298433 to 128298434 1 + TSS region transcription start site region 96389
Gm23241 10 128299419 to 128299522 103 - snRNA gene predicted gene, 23241
Cpgi2392 10 128302968 to 128303540 572 CpG island CpG island 2392
Tssr99852 10 128303168 to 128303192 24 - TSS region transcription start site region 99852
Tssr96390 10 128303322 to 128303352 30 + TSS region transcription start site region 96390
Pan2 10 128303335 to 128321358 18023 + protein coding gene PAN2 poly(A) specific ribonuclease subunit
Tssr96391 10 128303358 to 128303418 60 + TSS region transcription start site region 96391
A630052K13Rik 10 128307816 to 128310030 2214 - lncRNA gene RIKEN cDNA A630052K13 gene
Cnpy2 10 128322158 to 128327187 5029 + protein coding gene canopy FGF signaling regulator 2
Cpgi2393 10 128322386 to 128323009 623 CpG island CpG island 2393
Tssr96392 10 128322401 to 128322412 11 + TSS region transcription start site region 96392
Tssr96393 10 128322443 to 128322476 33 + TSS region transcription start site region 96393
Tssr96394 10 128322479 to 128322493 14 + TSS region transcription start site region 96394
Tssr96395 10 128322496 to 128322540 44 + TSS region transcription start site region 96395
Tssr96396 10 128322544 to 128322574 30 + TSS region transcription start site region 96396
Tssr96397 10 128322575 to 128322595 20 + TSS region transcription start site region 96397
Tssr96398 10 128322607 to 128322621 14 + TSS region transcription start site region 96398
Tssr96399 10 128322635 to 128322648 13 + TSS region transcription start site region 96399
Tssr96400 10 128322657 to 128322729 72 + TSS region transcription start site region 96400
Tssr96401 10 128322734 to 128322747 13 + TSS region transcription start site region 96401
Gm51822 10 128337139 to 128345408 8269 - lncRNA gene predicted gene, 51822
Cpgi2394 10 128337633 to 128338258 625 CpG island CpG island 2394
Cs 10 128337734 to 128362479 24745 + protein coding gene citrate synthase
Tssr96402 10 128337739 to 128337759 20 + TSS region transcription start site region 96402
Tssr96403 10 128337761 to 128337818 57 + TSS region transcription start site region 96403
Tssr96404 10 128337833 to 128337844 11 + TSS region transcription start site region 96404
Tssr99853 10 128337960 to 128337977 17 - TSS region transcription start site region 99853