Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:128180282-128330292

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rbms2 10 128131558 to 128180297 48739 - protein coding gene RNA binding motif, single stranded interacting protein 2
Tssr99847 10 128180265 to 128180307 42 - TSS region transcription start site region 99847
Tssr99848 10 128186084 to 128186113 29 - TSS region transcription start site region 99848
Tssr96351 10 128190483 to 128190500 17 + TSS region transcription start site region 96351
Gm4556 10 128190529 to 128190883 354 + pseudogene predicted gene 4556
Cpgi2386 10 128193930 to 128195478 1548 CpG island CpG island 2386
Tssr96352 10 128194446 to 128194466 20 + TSS region transcription start site region 96352
Tssr96353 10 128194602 to 128194613 11 + TSS region transcription start site region 96353
Tssr96354 10 128194631 to 128194667 36 + TSS region transcription start site region 96354
Gls2 10 128194635 to 128210004 15369 + protein coding gene glutaminase 2 (liver, mitochondrial)
Tssr96355 10 128194676 to 128194687 11 + TSS region transcription start site region 96355
Tssr96356 10 128194721 to 128194755 34 + TSS region transcription start site region 96356
Spryd4 10 128209908 to 128211794 1886 - protein coding gene SPRY domain containing 4
Cpgi2387 10 128211618 to 128212054 436 CpG island CpG island 2387
Tssr99849 10 128211766 to 128211775 9 - TSS region transcription start site region 99849
Tssr99850 10 128211788 to 128211823 35 - TSS region transcription start site region 99850
Cpgi2388 10 128213079 to 128213464 385 CpG island CpG island 2388
Tssr96357 10 128225830 to 128225845 15 + TSS region transcription start site region 96357
Mip 10 128225838 to 128231812 5974 + protein coding gene major intrinsic protein of lens fiber
Tssr96358 10 128225943 to 128225961 18 + TSS region transcription start site region 96358
Gm26847 10 128230590 to 128232790 2200 - lincRNA gene predicted gene, 26847
Tssr96359 10 128231386 to 128231397 11 + TSS region transcription start site region 96359
Tssr96360 10 128231424 to 128231435 11 + TSS region transcription start site region 96360
Tssr96361 10 128231581 to 128231594 13 + TSS region transcription start site region 96361
Tssr96362 10 128231630 to 128231641 11 + TSS region transcription start site region 96362
Tssr96363 10 128231743 to 128231754 11 + TSS region transcription start site region 96363
Tssr96364 10 128231755 to 128231770 15 + TSS region transcription start site region 96364
Cpgi2389 10 128232058 to 128232831 773 CpG island CpG island 2389
Timeless 10 128232065 to 128252941 20876 + protein coding gene timeless circadian clock 1
Tssr96365 10 128232072 to 128232094 22 + TSS region transcription start site region 96365
Tssr96366 10 128232096 to 128232101 5 + TSS region transcription start site region 96366
Tssr96367 10 128232310 to 128232355 45 + TSS region transcription start site region 96367
Tssr96368 10 128238034 to 128238069 35 + TSS region transcription start site region 96368
Tssr96369 10 128244828 to 128244831 3 + TSS region transcription start site region 96369
Tssr96370 10 128247266 to 128247332 66 + TSS region transcription start site region 96370
Apon 10 128254131 to 128255901 1770 + protein coding gene apolipoprotein N
Tssr96371 10 128254157 to 128254176 19 + TSS region transcription start site region 96371
Tssr96372 10 128254185 to 128254196 11 + TSS region transcription start site region 96372
Tssr96373 10 128255282 to 128255292 10 + TSS region transcription start site region 96373
Tssr96374 10 128268624 to 128268639 15 + TSS region transcription start site region 96374
Tssr96375 10 128268646 to 128268651 5 + TSS region transcription start site region 96375
Tssr96376 10 128268656 to 128268722 66 + TSS region transcription start site region 96376
Apof 10 128268671 to 128270153 1482 + protein coding gene apolipoprotein F
Tssr96377 10 128268850 to 128268869 19 + TSS region transcription start site region 96377
Tssr96378 10 128269173 to 128269194 21 + TSS region transcription start site region 96378
Tssr96379 10 128269201 to 128269213 12 + TSS region transcription start site region 96379
Tssr96380 10 128269326 to 128269341 15 + TSS region transcription start site region 96380
Cpgi2390 10 128270335 to 128270887 552 CpG island CpG island 2390
Tssr96381 10 128270506 to 128270541 35 + TSS region transcription start site region 96381
Tssr96382 10 128270546 to 128270577 31 + TSS region transcription start site region 96382
Stat2 10 128270559 to 128292849 22290 + protein coding gene signal transducer and activator of transcription 2
Tssr96383 10 128271934 to 128271942 8 + TSS region transcription start site region 96383
Tssr96384 10 128277375 to 128277401 26 + TSS region transcription start site region 96384
Tssr96385 10 128277639 to 128277658 19 + TSS region transcription start site region 96385
Tssr96386 10 128278771 to 128278788 17 + TSS region transcription start site region 96386
Cpgi2391 10 128283305 to 128283687 382 CpG island CpG island 2391
Tssr96387 10 128285046 to 128285050 4 + TSS region transcription start site region 96387
Tssr96388 10 128292491 to 128292499 8 + TSS region transcription start site region 96388
Il23a 10 128296140 to 128298084 1944 - protein coding gene interleukin 23, alpha subunit p19
Tssr99851 10 128298066 to 128298101 35 - TSS region transcription start site region 99851
Tssr96389 10 128298433 to 128298434 1 + TSS region transcription start site region 96389
Gm23241 10 128299419 to 128299524 105 - snRNA gene predicted gene, 23241
Cpgi2392 10 128302968 to 128303540 572 CpG island CpG island 2392
Tssr99852 10 128303168 to 128303192 24 - TSS region transcription start site region 99852
Tssr96390 10 128303322 to 128303352 30 + TSS region transcription start site region 96390
Pan2 10 128303335 to 128321358 18023 + protein coding gene PAN2 poly(A) specific ribonuclease subunit
Tssr96391 10 128303358 to 128303418 60 + TSS region transcription start site region 96391
A630052K13Rik 10 128307815 to 128310029 2214 unclassified gene RIKEN cDNA A630052K13 gene
Cpgi2393 10 128322386 to 128323009 623 CpG island CpG island 2393
Tssr96392 10 128322401 to 128322412 11 + TSS region transcription start site region 96392
Cnpy2 10 128322440 to 128327187 4747 + protein coding gene canopy FGF signaling regulator 2
Tssr96393 10 128322443 to 128322476 33 + TSS region transcription start site region 96393
Tssr96394 10 128322479 to 128322493 14 + TSS region transcription start site region 96394
Tssr96395 10 128322496 to 128322540 44 + TSS region transcription start site region 96395
Tssr96396 10 128322544 to 128322574 30 + TSS region transcription start site region 96396
Tssr96397 10 128322575 to 128322595 20 + TSS region transcription start site region 96397
Tssr96398 10 128322607 to 128322621 14 + TSS region transcription start site region 96398
Tssr96399 10 128322635 to 128322648 13 + TSS region transcription start site region 96399
Tssr96400 10 128322657 to 128322729 72 + TSS region transcription start site region 96400
Tssr96401 10 128322734 to 128322747 13 + TSS region transcription start site region 96401