Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:128135943-128315961

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rbms2 10 128131558 to 128180297 48739 - protein coding gene RNA binding motif, single stranded interacting protein 2
Tssr99835 10 128146476 to 128146493 17 - TSS region transcription start site region 99835
Tssr99836 10 128176439 to 128176465 26 - TSS region transcription start site region 99836
Tssr99837 10 128176468 to 128176489 21 - TSS region transcription start site region 99837
Tssr99838 10 128176591 to 128176611 20 - TSS region transcription start site region 99838
Tssr99839 10 128176623 to 128176645 22 - TSS region transcription start site region 99839
Tssr99840 10 128179978 to 128179990 12 - TSS region transcription start site region 99840
Tssr99841 10 128179997 to 128180006 9 - TSS region transcription start site region 99841
Tssr99842 10 128180016 to 128180024 8 - TSS region transcription start site region 99842
Tssr99843 10 128180040 to 128180058 18 - TSS region transcription start site region 99843
Tssr99844 10 128180101 to 128180112 11 - TSS region transcription start site region 99844
Tssr99845 10 128180206 to 128180218 12 - TSS region transcription start site region 99845
Tssr99846 10 128180229 to 128180254 25 - TSS region transcription start site region 99846
Tssr99847 10 128180265 to 128180307 42 - TSS region transcription start site region 99847
Tssr99848 10 128186084 to 128186113 29 - TSS region transcription start site region 99848
Tssr96351 10 128190483 to 128190500 17 + TSS region transcription start site region 96351
Gm4556 10 128190529 to 128190883 354 + pseudogene predicted gene 4556
Cpgi2386 10 128193930 to 128195478 1548 CpG island CpG island 2386
Tssr96352 10 128194446 to 128194466 20 + TSS region transcription start site region 96352
Tssr96353 10 128194602 to 128194613 11 + TSS region transcription start site region 96353
Tssr96354 10 128194631 to 128194667 36 + TSS region transcription start site region 96354
Gls2 10 128194635 to 128210004 15369 + protein coding gene glutaminase 2 (liver, mitochondrial)
Tssr96355 10 128194676 to 128194687 11 + TSS region transcription start site region 96355
Tssr96356 10 128194721 to 128194755 34 + TSS region transcription start site region 96356
Spryd4 10 128209908 to 128211794 1886 - protein coding gene SPRY domain containing 4
Cpgi2387 10 128211618 to 128212054 436 CpG island CpG island 2387
Tssr99849 10 128211766 to 128211775 9 - TSS region transcription start site region 99849
Tssr99850 10 128211788 to 128211823 35 - TSS region transcription start site region 99850
Cpgi2388 10 128213079 to 128213464 385 CpG island CpG island 2388
Tssr96357 10 128225830 to 128225845 15 + TSS region transcription start site region 96357
Mip 10 128225838 to 128231812 5974 + protein coding gene major intrinsic protein of lens fiber
Tssr96358 10 128225943 to 128225961 18 + TSS region transcription start site region 96358
Gm26847 10 128230590 to 128232790 2200 - lincRNA gene predicted gene, 26847
Tssr96359 10 128231386 to 128231397 11 + TSS region transcription start site region 96359
Tssr96360 10 128231424 to 128231435 11 + TSS region transcription start site region 96360
Tssr96361 10 128231581 to 128231594 13 + TSS region transcription start site region 96361
Tssr96362 10 128231630 to 128231641 11 + TSS region transcription start site region 96362
Tssr96363 10 128231743 to 128231754 11 + TSS region transcription start site region 96363
Tssr96364 10 128231755 to 128231770 15 + TSS region transcription start site region 96364
Cpgi2389 10 128232058 to 128232831 773 CpG island CpG island 2389
Timeless 10 128232065 to 128252941 20876 + protein coding gene timeless circadian clock 1
Tssr96365 10 128232072 to 128232094 22 + TSS region transcription start site region 96365
Tssr96366 10 128232096 to 128232101 5 + TSS region transcription start site region 96366
Tssr96367 10 128232310 to 128232355 45 + TSS region transcription start site region 96367
Tssr96368 10 128238034 to 128238069 35 + TSS region transcription start site region 96368
Tssr96369 10 128244828 to 128244831 3 + TSS region transcription start site region 96369
Tssr96370 10 128247266 to 128247332 66 + TSS region transcription start site region 96370
Apon 10 128254131 to 128255901 1770 + protein coding gene apolipoprotein N
Tssr96371 10 128254157 to 128254176 19 + TSS region transcription start site region 96371
Tssr96372 10 128254185 to 128254196 11 + TSS region transcription start site region 96372
Tssr96373 10 128255282 to 128255292 10 + TSS region transcription start site region 96373
Tssr96374 10 128268624 to 128268639 15 + TSS region transcription start site region 96374
Tssr96375 10 128268646 to 128268651 5 + TSS region transcription start site region 96375
Tssr96376 10 128268656 to 128268722 66 + TSS region transcription start site region 96376
Apof 10 128268671 to 128270153 1482 + protein coding gene apolipoprotein F
Tssr96377 10 128268850 to 128268869 19 + TSS region transcription start site region 96377
Tssr96378 10 128269173 to 128269194 21 + TSS region transcription start site region 96378
Tssr96379 10 128269201 to 128269213 12 + TSS region transcription start site region 96379
Tssr96380 10 128269326 to 128269341 15 + TSS region transcription start site region 96380
Cpgi2390 10 128270335 to 128270887 552 CpG island CpG island 2390
Tssr96381 10 128270506 to 128270541 35 + TSS region transcription start site region 96381
Tssr96382 10 128270546 to 128270577 31 + TSS region transcription start site region 96382
Stat2 10 128270559 to 128292849 22290 + protein coding gene signal transducer and activator of transcription 2
Tssr96383 10 128271934 to 128271942 8 + TSS region transcription start site region 96383
Tssr96384 10 128277375 to 128277401 26 + TSS region transcription start site region 96384
Tssr96385 10 128277639 to 128277658 19 + TSS region transcription start site region 96385
Tssr96386 10 128278771 to 128278788 17 + TSS region transcription start site region 96386
Cpgi2391 10 128283305 to 128283687 382 CpG island CpG island 2391
Tssr96387 10 128285046 to 128285050 4 + TSS region transcription start site region 96387
Tssr96388 10 128292491 to 128292499 8 + TSS region transcription start site region 96388
Il23a 10 128296140 to 128298084 1944 - protein coding gene interleukin 23, alpha subunit p19
Tssr99851 10 128298066 to 128298101 35 - TSS region transcription start site region 99851
Tssr96389 10 128298433 to 128298434 1 + TSS region transcription start site region 96389
Gm23241 10 128299419 to 128299524 105 - snRNA gene predicted gene, 23241
Cpgi2392 10 128302968 to 128303540 572 CpG island CpG island 2392
Tssr99852 10 128303168 to 128303192 24 - TSS region transcription start site region 99852
Tssr96390 10 128303322 to 128303352 30 + TSS region transcription start site region 96390
Pan2 10 128303335 to 128321358 18023 + protein coding gene PAN2 poly(A) specific ribonuclease subunit
Tssr96391 10 128303358 to 128303418 60 + TSS region transcription start site region 96391
A630052K13Rik 10 128307815 to 128310029 2214 unclassified gene RIKEN cDNA A630052K13 gene