Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 10:128080040-128280058

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112 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm47438 10 128081354 to 128082970 1616 - lncRNA gene predicted gene, 47438
Cpgi2382 10 128082934 to 128084147 1213 CpG island CpG island 2382
Tssr99834 10 128082968 to 128082981 13 - TSS region transcription start site region 99834
Tssr96319 10 128083301 to 128083309 8 + TSS region transcription start site region 96319
Atp5b 10 128083307 to 128090388 7081 + protein coding gene ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
Tssr96320 10 128083891 to 128083938 47 + TSS region transcription start site region 96320
Tssr96321 10 128083941 to 128083985 44 + TSS region transcription start site region 96321
Snord59a 10 128084143 to 128084216 73 + snoRNA gene small nucleolar RNA, C/D box 59A
Mir677 10 128085286 to 128085363 77 + miRNA gene microRNA 677
Gm50449 10 128085289 to 128085360 71 + snoRNA gene Predicted gene, 50449
Tssr96322 10 128085510 to 128085528 18 + TSS region transcription start site region 96322
Tssr96323 10 128086031 to 128086097 66 + TSS region transcription start site region 96323
Tssr96324 10 128086132 to 128086167 35 + TSS region transcription start site region 96324
Tssr96325 10 128086292 to 128086306 14 + TSS region transcription start site region 96325
Tssr96326 10 128086309 to 128086322 13 + TSS region transcription start site region 96326
Tssr96327 10 128086325 to 128086349 24 + TSS region transcription start site region 96327
Tssr96328 10 128086372 to 128086389 17 + TSS region transcription start site region 96328
Tssr96329 10 128088313 to 128088365 52 + TSS region transcription start site region 96329
Tssr96330 10 128088373 to 128088430 57 + TSS region transcription start site region 96330
Tssr96331 10 128090157 to 128090205 48 + TSS region transcription start site region 96331
Tssr96332 10 128091124 to 128091135 11 + TSS region transcription start site region 96332
Tssr96333 10 128091138 to 128091158 20 + TSS region transcription start site region 96333
Tssr96334 10 128091159 to 128091168 9 + TSS region transcription start site region 96334
Tssr96335 10 128091174 to 128091186 12 + TSS region transcription start site region 96335
Tssr96336 10 128091576 to 128091595 19 + TSS region transcription start site region 96336
Baz2a 10 128091577 to 128129303 37726 + protein coding gene bromodomain adjacent to zinc finger domain, 2A
Tssr96337 10 128091596 to 128091624 28 + TSS region transcription start site region 96337
Tssr96338 10 128092167 to 128092193 26 + TSS region transcription start site region 96338
Cpgi2383 10 128092223 to 128093659 1436 CpG island CpG island 2383
Tssr96339 10 128092658 to 128092700 42 + TSS region transcription start site region 96339
Tssr96340 10 128092753 to 128092769 16 + TSS region transcription start site region 96340
Tssr96341 10 128092771 to 128092819 48 + TSS region transcription start site region 96341
Tssr96342 10 128093243 to 128093265 22 + TSS region transcription start site region 96342
Cpgi2384 10 128094701 to 128094928 227 CpG island CpG island 2384
Cpgi2385 10 128096474 to 128097902 1428 CpG island CpG island 2385
Tssr96343 10 128096851 to 128096899 48 + TSS region transcription start site region 96343
Tssr96344 10 128096908 to 128096909 1 + TSS region transcription start site region 96344
Tssr96345 10 128096915 to 128096926 11 + TSS region transcription start site region 96345
Tssr96346 10 128099440 to 128099444 4 + TSS region transcription start site region 96346
Tssr96347 10 128104064 to 128104068 4 + TSS region transcription start site region 96347
Tssr96348 10 128108957 to 128109004 47 + TSS region transcription start site region 96348
Tssr96349 10 128110760 to 128110775 15 + TSS region transcription start site region 96349
Tssr96350 10 128110811 to 128110838 27 + TSS region transcription start site region 96350
Gm51821 10 128121994 to 128125563 3569 - lncRNA gene predicted gene, 51821
Rbms2 10 128131558 to 128180297 48739 - protein coding gene RNA binding motif, single stranded interacting protein 2
Tssr99835 10 128146476 to 128146493 17 - TSS region transcription start site region 99835
Tssr99836 10 128176439 to 128176465 26 - TSS region transcription start site region 99836
Tssr99837 10 128176468 to 128176489 21 - TSS region transcription start site region 99837
Tssr99838 10 128176591 to 128176611 20 - TSS region transcription start site region 99838
Tssr99839 10 128176623 to 128176645 22 - TSS region transcription start site region 99839
Tssr99840 10 128179978 to 128179990 12 - TSS region transcription start site region 99840
Tssr99841 10 128179997 to 128180006 9 - TSS region transcription start site region 99841
Tssr99842 10 128180016 to 128180024 8 - TSS region transcription start site region 99842
Tssr99843 10 128180040 to 128180058 18 - TSS region transcription start site region 99843
Tssr99844 10 128180101 to 128180112 11 - TSS region transcription start site region 99844
Tssr99845 10 128180206 to 128180218 12 - TSS region transcription start site region 99845
Tssr99846 10 128180229 to 128180254 25 - TSS region transcription start site region 99846
Tssr99847 10 128180265 to 128180307 42 - TSS region transcription start site region 99847
Tssr99848 10 128186084 to 128186113 29 - TSS region transcription start site region 99848
Tssr96351 10 128190483 to 128190500 17 + TSS region transcription start site region 96351
Gm4556 10 128190529 to 128190883 354 + pseudogene predicted gene 4556
Cpgi2386 10 128193930 to 128195478 1548 CpG island CpG island 2386
Tssr96352 10 128194446 to 128194466 20 + TSS region transcription start site region 96352
Tssr96353 10 128194602 to 128194613 11 + TSS region transcription start site region 96353
Tssr96354 10 128194631 to 128194667 36 + TSS region transcription start site region 96354
Gls2 10 128194635 to 128210004 15369 + protein coding gene glutaminase 2 (liver, mitochondrial)
Tssr96355 10 128194676 to 128194687 11 + TSS region transcription start site region 96355
Tssr96356 10 128194721 to 128194755 34 + TSS region transcription start site region 96356
Gm52965 10 128196071 to 128197594 1523 + lncRNA gene predicted gene, 52965
Spryd4 10 128209908 to 128211794 1886 - protein coding gene SPRY domain containing 4
Cpgi2387 10 128211618 to 128212054 436 CpG island CpG island 2387
Tssr99849 10 128211766 to 128211775 9 - TSS region transcription start site region 99849
Tssr99850 10 128211788 to 128211823 35 - TSS region transcription start site region 99850
Cpgi2388 10 128213079 to 128213464 385 CpG island CpG island 2388
Tssr96357 10 128225830 to 128225845 15 + TSS region transcription start site region 96357
Mip 10 128225838 to 128231812 5974 + protein coding gene major intrinsic protein of lens fiber
Tssr96358 10 128225943 to 128225961 18 + TSS region transcription start site region 96358
Gm26847 10 128230590 to 128233063 2473 - lncRNA gene predicted gene, 26847
Tssr96359 10 128231386 to 128231397 11 + TSS region transcription start site region 96359
Tssr96360 10 128231424 to 128231435 11 + TSS region transcription start site region 96360
Tssr96361 10 128231581 to 128231594 13 + TSS region transcription start site region 96361
Tssr96362 10 128231630 to 128231641 11 + TSS region transcription start site region 96362
Tssr96363 10 128231743 to 128231754 11 + TSS region transcription start site region 96363
Tssr96364 10 128231755 to 128231770 15 + TSS region transcription start site region 96364
Cpgi2389 10 128232058 to 128232831 773 CpG island CpG island 2389
Timeless 10 128232065 to 128252941 20876 + protein coding gene timeless circadian clock 1
Tssr96365 10 128232072 to 128232094 22 + TSS region transcription start site region 96365
Tssr96366 10 128232096 to 128232101 5 + TSS region transcription start site region 96366
Tssr96367 10 128232310 to 128232355 45 + TSS region transcription start site region 96367
Tssr96368 10 128238034 to 128238069 35 + TSS region transcription start site region 96368
Tssr96369 10 128244828 to 128244831 3 + TSS region transcription start site region 96369
Tssr96370 10 128247266 to 128247332 66 + TSS region transcription start site region 96370
Apon 10 128254131 to 128255901 1770 + protein coding gene apolipoprotein N
Tssr96371 10 128254157 to 128254176 19 + TSS region transcription start site region 96371
Tssr96372 10 128254185 to 128254196 11 + TSS region transcription start site region 96372
Tssr96373 10 128255282 to 128255292 10 + TSS region transcription start site region 96373
Apof 10 128267997 to 128270153 2156 + protein coding gene apolipoprotein F
Tssr96374 10 128268624 to 128268639 15 + TSS region transcription start site region 96374
Tssr96375 10 128268646 to 128268651 5 + TSS region transcription start site region 96375
Tssr96376 10 128268656 to 128268722 66 + TSS region transcription start site region 96376
Tssr96377 10 128268850 to 128268869 19 + TSS region transcription start site region 96377
Tssr96378 10 128269173 to 128269194 21 + TSS region transcription start site region 96378
Tssr96379 10 128269201 to 128269213 12 + TSS region transcription start site region 96379
Tssr96380 10 128269326 to 128269341 15 + TSS region transcription start site region 96380
Cpgi2390 10 128270335 to 128270887 552 CpG island CpG island 2390
Tssr96381 10 128270506 to 128270541 35 + TSS region transcription start site region 96381
Tssr96382 10 128270546 to 128270577 31 + TSS region transcription start site region 96382
Stat2 10 128270559 to 128292849 22290 + protein coding gene signal transducer and activator of transcription 2
Tssr96383 10 128271934 to 128271942 8 + TSS region transcription start site region 96383
Tssr96384 10 128277375 to 128277401 26 + TSS region transcription start site region 96384
Tssr96385 10 128277639 to 128277658 19 + TSS region transcription start site region 96385
Tssr96386 10 128278771 to 128278788 17 + TSS region transcription start site region 96386