Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:128042658-128142700

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Naca 10 128035575 to 128048637 13062 + protein coding gene nascent polypeptide-associated complex alpha polypeptide
Tssr96305 10 128042690 to 128042695 5 + TSS region transcription start site region 96305
Tssr96306 10 128042833 to 128042847 14 + TSS region transcription start site region 96306
Tssr96307 10 128042892 to 128042911 19 + TSS region transcription start site region 96307
Tssr96308 10 128043118 to 128043128 10 + TSS region transcription start site region 96308
Tssr96309 10 128043209 to 128043220 11 + TSS region transcription start site region 96309
Tssr96310 10 128043443 to 128043454 11 + TSS region transcription start site region 96310
Tssr99831 10 128043813 to 128043826 13 - TSS region transcription start site region 99831
Tssr96311 10 128052303 to 128052308 5 + TSS region transcription start site region 96311
Cpgi2381 10 128058406 to 128060030 1624 CpG island CpG island 2381
Tssr99832 10 128058745 to 128058754 9 - TSS region transcription start site region 99832
Tssr99833 10 128058790 to 128058843 53 - TSS region transcription start site region 99833
Tssr96312 10 128058947 to 128058960 13 + TSS region transcription start site region 96312
Ptges3 10 128058954 to 128077272 18318 + protein coding gene prostaglandin E synthase 3
Tssr96313 10 128058974 to 128059025 51 + TSS region transcription start site region 96313
Tssr96314 10 128059035 to 128059052 17 + TSS region transcription start site region 96314
Tssr96315 10 128059064 to 128059083 19 + TSS region transcription start site region 96315
Tssr96316 10 128059096 to 128059153 57 + TSS region transcription start site region 96316
Tssr96317 10 128061340 to 128061344 4 + TSS region transcription start site region 96317
Tssr96318 10 128068211 to 128068222 11 + TSS region transcription start site region 96318
Gm47438 10 128081354 to 128082970 1616 - lincRNA gene predicted gene, 47438
Cpgi2382 10 128082934 to 128084147 1213 CpG island CpG island 2382
Tssr99834 10 128082968 to 128082981 13 - TSS region transcription start site region 99834
Tssr96319 10 128083301 to 128083309 8 + TSS region transcription start site region 96319
Atp5b 10 128083307 to 128090388 7081 + protein coding gene ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit
Tssr96320 10 128083891 to 128083938 47 + TSS region transcription start site region 96320
Tssr96321 10 128083941 to 128083985 44 + TSS region transcription start site region 96321
Snord59a 10 128084143 to 128084216 73 + snoRNA gene small nucleolar RNA, C/D box 59A
Mir677 10 128085286 to 128085363 77 + miRNA gene microRNA 677
Tssr96322 10 128085510 to 128085528 18 + TSS region transcription start site region 96322
Tssr96323 10 128086031 to 128086097 66 + TSS region transcription start site region 96323
Tssr96324 10 128086132 to 128086167 35 + TSS region transcription start site region 96324
Tssr96325 10 128086292 to 128086306 14 + TSS region transcription start site region 96325
Tssr96326 10 128086309 to 128086322 13 + TSS region transcription start site region 96326
Tssr96327 10 128086325 to 128086349 24 + TSS region transcription start site region 96327
Tssr96328 10 128086372 to 128086389 17 + TSS region transcription start site region 96328
Tssr96329 10 128088313 to 128088365 52 + TSS region transcription start site region 96329
Tssr96330 10 128088373 to 128088430 57 + TSS region transcription start site region 96330
Tssr96331 10 128090157 to 128090205 48 + TSS region transcription start site region 96331
Tssr96332 10 128091124 to 128091135 11 + TSS region transcription start site region 96332
Tssr96333 10 128091138 to 128091158 20 + TSS region transcription start site region 96333
Tssr96334 10 128091159 to 128091168 9 + TSS region transcription start site region 96334
Tssr96335 10 128091174 to 128091186 12 + TSS region transcription start site region 96335
Tssr96336 10 128091576 to 128091595 19 + TSS region transcription start site region 96336
Baz2a 10 128091577 to 128129303 37726 + protein coding gene bromodomain adjacent to zinc finger domain, 2A
Tssr96337 10 128091596 to 128091624 28 + TSS region transcription start site region 96337
Tssr96338 10 128092167 to 128092193 26 + TSS region transcription start site region 96338
Cpgi2383 10 128092223 to 128093659 1436 CpG island CpG island 2383
Tssr96339 10 128092658 to 128092700 42 + TSS region transcription start site region 96339
Tssr96340 10 128092753 to 128092769 16 + TSS region transcription start site region 96340
Tssr96341 10 128092771 to 128092819 48 + TSS region transcription start site region 96341
Tssr96342 10 128093243 to 128093265 22 + TSS region transcription start site region 96342
Cpgi2384 10 128094701 to 128094928 227 CpG island CpG island 2384
Cpgi2385 10 128096474 to 128097902 1428 CpG island CpG island 2385
Tssr96343 10 128096851 to 128096899 48 + TSS region transcription start site region 96343
Tssr96344 10 128096908 to 128096909 1 + TSS region transcription start site region 96344
Tssr96345 10 128096915 to 128096926 11 + TSS region transcription start site region 96345
Tssr96346 10 128099440 to 128099444 4 + TSS region transcription start site region 96346
Tssr96347 10 128104064 to 128104068 4 + TSS region transcription start site region 96347
Tssr96348 10 128108957 to 128109004 47 + TSS region transcription start site region 96348
Tssr96349 10 128110760 to 128110775 15 + TSS region transcription start site region 96349
Tssr96350 10 128110811 to 128110838 27 + TSS region transcription start site region 96350
Rbms2 10 128131558 to 128180297 48739 - protein coding gene RNA binding motif, single stranded interacting protein 2