Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 10:127893219-128003560

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr96274 10 127893968 to 127893984 16 + TSS region transcription start site region 96274
Tssr96275 10 127898515 to 127898532 17 + TSS region transcription start site region 96275
Sdr9c7 10 127898535 to 127911761 13226 + protein coding gene 4short chain dehydrogenase/reductase family 9C, member 7
Tssr96276 10 127898538 to 127898549 11 + TSS region transcription start site region 96276
Tssr96277 10 127898550 to 127898555 5 + TSS region transcription start site region 96277
Tssr96278 10 127901959 to 127901980 21 + TSS region transcription start site region 96278
Tssr96279 10 127902000 to 127902034 34 + TSS region transcription start site region 96279
Tssr96280 10 127902041 to 127902056 15 + TSS region transcription start site region 96280
Opfaq7 10 127910449 to 129630506 1720057 QTL open field activity QTL 7
Gm40804 10 127913517 to 127925501 11984 - lncRNA gene predicted gene, 40804
Gm15905 10 127921069 to 127921366 297 + pseudogene predicted gene 15905
Gm40805 10 127935541 to 127952515 16974 - lncRNA gene predicted gene, 40805
Cpgi2378 10 127936656 to 127936926 270 CpG island CpG island 2378
Gm15900 10 127948219 to 127948560 341 - pseudogene predicted gene 15900
Gm23996 10 127953045 to 127953175 130 - snoRNA gene predicted gene, 23996
Gm40806 10 127961446 to 127971088 9642 - lncRNA gene predicted gene, 40806
Tssr96281 10 127961525 to 127961549 24 + TSS region transcription start site region 96281
Gm47949 10 127961556 to 127961929 373 + pseudogene predicted gene, 47949
Hsd17b6 10 127990936 to 128007611 16675 - protein coding gene hydroxysteroid (17-beta) dehydrogenase 6
Tssr99828 10 127991267 to 127991284 17 - TSS region transcription start site region 99828
Tssr99829 10 127998326 to 127998329 3 - TSS region transcription start site region 99829